Changes in the metabolic potential of the sponge microbiome under ocean acidification
Anthropogenic CO(2) emissions are causing ocean acidification, which can affect the physiology of marine organisms. Here we assess the possible effects of ocean acidification on the metabolic potential of sponge symbionts, inferred by metagenomic analyses of the microbiomes of two sponge species sam...
Published in: | Nature Communications |
---|---|
Main Authors: | , , , , , , |
Format: | Text |
Language: | English |
Published: |
Nature Publishing Group UK
2019
|
Subjects: | |
Online Access: | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742649/ http://www.ncbi.nlm.nih.gov/pubmed/31515490 https://doi.org/10.1038/s41467-019-12156-y |
id |
ftpubmed:oai:pubmedcentral.nih.gov:6742649 |
---|---|
record_format |
openpolar |
spelling |
ftpubmed:oai:pubmedcentral.nih.gov:6742649 2023-05-15T17:49:25+02:00 Changes in the metabolic potential of the sponge microbiome under ocean acidification Botté, Emmanuelle S. Nielsen, Shaun Abdul Wahab, Muhammad Azmi Webster, John Robbins, Steven Thomas, Torsten Webster, Nicole S. 2019-09-12 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742649/ http://www.ncbi.nlm.nih.gov/pubmed/31515490 https://doi.org/10.1038/s41467-019-12156-y en eng Nature Publishing Group UK http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742649/ http://www.ncbi.nlm.nih.gov/pubmed/31515490 http://dx.doi.org/10.1038/s41467-019-12156-y © Crown 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. CC-BY Article Text 2019 ftpubmed https://doi.org/10.1038/s41467-019-12156-y 2019-09-22T00:28:04Z Anthropogenic CO(2) emissions are causing ocean acidification, which can affect the physiology of marine organisms. Here we assess the possible effects of ocean acidification on the metabolic potential of sponge symbionts, inferred by metagenomic analyses of the microbiomes of two sponge species sampled at a shallow volcanic CO(2) seep and a nearby control reef. When comparing microbial functions between the seep and control sites, the microbiome of the sponge Stylissa flabelliformis (which is more abundant at the control site) exhibits at the seep reduced potential for uptake of exogenous carbohydrates and amino acids, and for degradation of host-derived creatine, creatinine and taurine. The microbiome of Coelocarteria singaporensis (which is more abundant at the seep) exhibits reduced potential for carbohydrate import at the seep, but greater capacity for archaeal carbon fixation via the 3-hydroxypropionate/4-hydroxybutyrate pathway, as well as archaeal and bacterial urea production and ammonia assimilation from arginine and creatine catabolism. Together these metabolic features might contribute to enhanced tolerance of the sponge symbionts, and possibly their host, to ocean acidification. Text Ocean acidification PubMed Central (PMC) Nature Communications 10 1 |
institution |
Open Polar |
collection |
PubMed Central (PMC) |
op_collection_id |
ftpubmed |
language |
English |
topic |
Article |
spellingShingle |
Article Botté, Emmanuelle S. Nielsen, Shaun Abdul Wahab, Muhammad Azmi Webster, John Robbins, Steven Thomas, Torsten Webster, Nicole S. Changes in the metabolic potential of the sponge microbiome under ocean acidification |
topic_facet |
Article |
description |
Anthropogenic CO(2) emissions are causing ocean acidification, which can affect the physiology of marine organisms. Here we assess the possible effects of ocean acidification on the metabolic potential of sponge symbionts, inferred by metagenomic analyses of the microbiomes of two sponge species sampled at a shallow volcanic CO(2) seep and a nearby control reef. When comparing microbial functions between the seep and control sites, the microbiome of the sponge Stylissa flabelliformis (which is more abundant at the control site) exhibits at the seep reduced potential for uptake of exogenous carbohydrates and amino acids, and for degradation of host-derived creatine, creatinine and taurine. The microbiome of Coelocarteria singaporensis (which is more abundant at the seep) exhibits reduced potential for carbohydrate import at the seep, but greater capacity for archaeal carbon fixation via the 3-hydroxypropionate/4-hydroxybutyrate pathway, as well as archaeal and bacterial urea production and ammonia assimilation from arginine and creatine catabolism. Together these metabolic features might contribute to enhanced tolerance of the sponge symbionts, and possibly their host, to ocean acidification. |
format |
Text |
author |
Botté, Emmanuelle S. Nielsen, Shaun Abdul Wahab, Muhammad Azmi Webster, John Robbins, Steven Thomas, Torsten Webster, Nicole S. |
author_facet |
Botté, Emmanuelle S. Nielsen, Shaun Abdul Wahab, Muhammad Azmi Webster, John Robbins, Steven Thomas, Torsten Webster, Nicole S. |
author_sort |
Botté, Emmanuelle S. |
title |
Changes in the metabolic potential of the sponge microbiome under ocean acidification |
title_short |
Changes in the metabolic potential of the sponge microbiome under ocean acidification |
title_full |
Changes in the metabolic potential of the sponge microbiome under ocean acidification |
title_fullStr |
Changes in the metabolic potential of the sponge microbiome under ocean acidification |
title_full_unstemmed |
Changes in the metabolic potential of the sponge microbiome under ocean acidification |
title_sort |
changes in the metabolic potential of the sponge microbiome under ocean acidification |
publisher |
Nature Publishing Group UK |
publishDate |
2019 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742649/ http://www.ncbi.nlm.nih.gov/pubmed/31515490 https://doi.org/10.1038/s41467-019-12156-y |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6742649/ http://www.ncbi.nlm.nih.gov/pubmed/31515490 http://dx.doi.org/10.1038/s41467-019-12156-y |
op_rights |
© Crown 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1038/s41467-019-12156-y |
container_title |
Nature Communications |
container_volume |
10 |
container_issue |
1 |
_version_ |
1766155749232214016 |