Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein

Many marine species inhabiting icy seawater produce antifreeze proteins (AFPs) to prevent their body fluids from freezing. The sculpin species of the superfamily Cottoidea are widely found from the Arctic to southern hemisphere, some of which are known to express AFP. Here we clarified DNA sequence...

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Published in:Biomolecules
Main Authors: Yamazaki, Aya, Nishimiya, Yoshiyuki, Tsuda, Sakae, Togashi, Koji, Munehara, Hiroyuki
Format: Text
Language:English
Published: MDPI 2019
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6523315/
http://www.ncbi.nlm.nih.gov/pubmed/30959891
https://doi.org/10.3390/biom9040139
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spelling ftpubmed:oai:pubmedcentral.nih.gov:6523315 2023-05-15T14:48:14+02:00 Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein Yamazaki, Aya Nishimiya, Yoshiyuki Tsuda, Sakae Togashi, Koji Munehara, Hiroyuki 2019-04-06 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6523315/ http://www.ncbi.nlm.nih.gov/pubmed/30959891 https://doi.org/10.3390/biom9040139 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6523315/ http://www.ncbi.nlm.nih.gov/pubmed/30959891 http://dx.doi.org/10.3390/biom9040139 © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). CC-BY Article Text 2019 ftpubmed https://doi.org/10.3390/biom9040139 2019-06-09T00:14:34Z Many marine species inhabiting icy seawater produce antifreeze proteins (AFPs) to prevent their body fluids from freezing. The sculpin species of the superfamily Cottoidea are widely found from the Arctic to southern hemisphere, some of which are known to express AFP. Here we clarified DNA sequence encoding type I AFP for 3 species of 2 families (Cottidae and Agonidae) belonging to Cottoidea. We also examined antifreeze activity for 3 families and 32 species of Cottoidea (Cottidae, Agonidae, and Rhamphocottidae). These fishes were collected in 2013–2015 from the Arctic Ocean, Alaska, Japan. We could identify 8 distinct DNA sequences exhibiting a high similarity to those reported for Myoxocephalus species, suggesting that Cottidae and Agonidae share the same DNA sequence encoding type I AFP. Among the 3 families, Rhamphocottidae that experience a warm current did not show antifreeze activity. The species inhabiting the Arctic Ocean and Northern Japan that often covered with ice floe showed high activity, while those inhabiting Alaska, Southern Japan with a warm current showed low/no activity. These results suggest that Cottoidea acquires type I AFP gene before dividing into Cottidae and Agonidae, and have adapted to each location with optimal antifreeze activity level. Text Arctic Arctic Ocean Alaska PubMed Central (PMC) Arctic Arctic Ocean Pacific Biomolecules 9 4 139
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Yamazaki, Aya
Nishimiya, Yoshiyuki
Tsuda, Sakae
Togashi, Koji
Munehara, Hiroyuki
Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
topic_facet Article
description Many marine species inhabiting icy seawater produce antifreeze proteins (AFPs) to prevent their body fluids from freezing. The sculpin species of the superfamily Cottoidea are widely found from the Arctic to southern hemisphere, some of which are known to express AFP. Here we clarified DNA sequence encoding type I AFP for 3 species of 2 families (Cottidae and Agonidae) belonging to Cottoidea. We also examined antifreeze activity for 3 families and 32 species of Cottoidea (Cottidae, Agonidae, and Rhamphocottidae). These fishes were collected in 2013–2015 from the Arctic Ocean, Alaska, Japan. We could identify 8 distinct DNA sequences exhibiting a high similarity to those reported for Myoxocephalus species, suggesting that Cottidae and Agonidae share the same DNA sequence encoding type I AFP. Among the 3 families, Rhamphocottidae that experience a warm current did not show antifreeze activity. The species inhabiting the Arctic Ocean and Northern Japan that often covered with ice floe showed high activity, while those inhabiting Alaska, Southern Japan with a warm current showed low/no activity. These results suggest that Cottoidea acquires type I AFP gene before dividing into Cottidae and Agonidae, and have adapted to each location with optimal antifreeze activity level.
format Text
author Yamazaki, Aya
Nishimiya, Yoshiyuki
Tsuda, Sakae
Togashi, Koji
Munehara, Hiroyuki
author_facet Yamazaki, Aya
Nishimiya, Yoshiyuki
Tsuda, Sakae
Togashi, Koji
Munehara, Hiroyuki
author_sort Yamazaki, Aya
title Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
title_short Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
title_full Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
title_fullStr Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
title_full_unstemmed Freeze Tolerance in Sculpins (Pisces; Cottoidea) Inhabiting North Pacific and Arctic Oceans: Antifreeze Activity and Gene Sequences of the Antifreeze Protein
title_sort freeze tolerance in sculpins (pisces; cottoidea) inhabiting north pacific and arctic oceans: antifreeze activity and gene sequences of the antifreeze protein
publisher MDPI
publishDate 2019
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6523315/
http://www.ncbi.nlm.nih.gov/pubmed/30959891
https://doi.org/10.3390/biom9040139
geographic Arctic
Arctic Ocean
Pacific
geographic_facet Arctic
Arctic Ocean
Pacific
genre Arctic
Arctic Ocean
Alaska
genre_facet Arctic
Arctic Ocean
Alaska
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6523315/
http://www.ncbi.nlm.nih.gov/pubmed/30959891
http://dx.doi.org/10.3390/biom9040139
op_rights © 2019 by the authors.
Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/biom9040139
container_title Biomolecules
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container_issue 4
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