Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil
Birds are the natural reservoir of viruses with zoonotic potential, as well as contributing to the evolution, emergence, and dissemination of novel viruses. In this study, we applied a high-throughput screening approach to identify the diversity of viruses in 118 samples of birds captured between Oc...
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ftpubmed:oai:pubmedcentral.nih.gov:6447618 2023-05-15T15:23:18+02:00 Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil de Souza, William Marciel Fumagalli, Marcílio Jorge de Araujo, Jansen Ometto, Tatiana Modha, Sejal Thomazelli, Luciano Matsumiya Durigon, Edison Luís Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes 2019-04-03 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447618/ http://www.ncbi.nlm.nih.gov/pubmed/30944402 https://doi.org/10.1038/s41598-019-42110-3 en eng Nature Publishing Group UK http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447618/ http://www.ncbi.nlm.nih.gov/pubmed/30944402 http://dx.doi.org/10.1038/s41598-019-42110-3 © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. CC-BY Article Text 2019 ftpubmed https://doi.org/10.1038/s41598-019-42110-3 2019-04-14T00:22:15Z Birds are the natural reservoir of viruses with zoonotic potential, as well as contributing to the evolution, emergence, and dissemination of novel viruses. In this study, we applied a high-throughput screening approach to identify the diversity of viruses in 118 samples of birds captured between October 2006 to October 2010 in the North and Northeast regions of Brazil. We found nearly complete genomes of novel species of astrovirus and calicivirus in cloacal swabs of ruddy turnstones (Arenaria interpres) collected in Coroa do Avião islet, Pernambuco State. These viruses are positive-sense single-stranded RNA with a genome of ~7 to 8 kb, and were designated as Ruddy turnstone astrovirus (RtAstV) and Ruddy turnstone calicivirus (RTCV), respectively. Phylogenetic analysis showed that RtAstV and RTCV grouped in a monophyletic clade with viruses identified from poultry samples (i.e., chicken, goose, and turkey), including viruses associated with acute nephritis in chickens. Attempts of viral propagation in monkey and chicken cell lines for both viruses were unsuccessful. Also, we found genomes related with viral families that infect invertebrates and plants, suggesting that they might be ingested in the birds’ diet. In sum, these findings shed new light on the diversity of viruses in migratory birds with the notable characterization of a novel astrovirus and calicivirus. Text Arenaria interpres Ruddy Turnstone PubMed Central (PMC) Scientific Reports 9 1 |
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Article de Souza, William Marciel Fumagalli, Marcílio Jorge de Araujo, Jansen Ometto, Tatiana Modha, Sejal Thomazelli, Luciano Matsumiya Durigon, Edison Luís Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
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Birds are the natural reservoir of viruses with zoonotic potential, as well as contributing to the evolution, emergence, and dissemination of novel viruses. In this study, we applied a high-throughput screening approach to identify the diversity of viruses in 118 samples of birds captured between October 2006 to October 2010 in the North and Northeast regions of Brazil. We found nearly complete genomes of novel species of astrovirus and calicivirus in cloacal swabs of ruddy turnstones (Arenaria interpres) collected in Coroa do Avião islet, Pernambuco State. These viruses are positive-sense single-stranded RNA with a genome of ~7 to 8 kb, and were designated as Ruddy turnstone astrovirus (RtAstV) and Ruddy turnstone calicivirus (RTCV), respectively. Phylogenetic analysis showed that RtAstV and RTCV grouped in a monophyletic clade with viruses identified from poultry samples (i.e., chicken, goose, and turkey), including viruses associated with acute nephritis in chickens. Attempts of viral propagation in monkey and chicken cell lines for both viruses were unsuccessful. Also, we found genomes related with viral families that infect invertebrates and plants, suggesting that they might be ingested in the birds’ diet. In sum, these findings shed new light on the diversity of viruses in migratory birds with the notable characterization of a novel astrovirus and calicivirus. |
format |
Text |
author |
de Souza, William Marciel Fumagalli, Marcílio Jorge de Araujo, Jansen Ometto, Tatiana Modha, Sejal Thomazelli, Luciano Matsumiya Durigon, Edison Luís Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes |
author_facet |
de Souza, William Marciel Fumagalli, Marcílio Jorge de Araujo, Jansen Ometto, Tatiana Modha, Sejal Thomazelli, Luciano Matsumiya Durigon, Edison Luís Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes |
author_sort |
de Souza, William Marciel |
title |
Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
title_short |
Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
title_full |
Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
title_fullStr |
Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
title_full_unstemmed |
Discovery of novel astrovirus and calicivirus identified in ruddy turnstones in Brazil |
title_sort |
discovery of novel astrovirus and calicivirus identified in ruddy turnstones in brazil |
publisher |
Nature Publishing Group UK |
publishDate |
2019 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447618/ http://www.ncbi.nlm.nih.gov/pubmed/30944402 https://doi.org/10.1038/s41598-019-42110-3 |
genre |
Arenaria interpres Ruddy Turnstone |
genre_facet |
Arenaria interpres Ruddy Turnstone |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447618/ http://www.ncbi.nlm.nih.gov/pubmed/30944402 http://dx.doi.org/10.1038/s41598-019-42110-3 |
op_rights |
© The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1038/s41598-019-42110-3 |
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Scientific Reports |
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9 |
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1 |
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1766354009406308352 |