Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States

In the Southeast USA, major contributors to estuarine soundscapes are the courtship calls produced by fish species belonging to the family Sciaenidae. Long-term monitoring of sciaenid courtship sounds may be valuable in understanding reproductive phenology, but this approach produces massive acousti...

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Published in:PLOS ONE
Main Authors: Monczak, Agnieszka, Ji, Yiming, Soueidan, Jamileh, Montie, Eric W.
Format: Text
Language:English
Published: Public Library of Science 2019
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334970/
http://www.ncbi.nlm.nih.gov/pubmed/30650120
https://doi.org/10.1371/journal.pone.0209914
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spelling ftpubmed:oai:pubmedcentral.nih.gov:6334970 2023-05-15T18:06:05+02:00 Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States Monczak, Agnieszka Ji, Yiming Soueidan, Jamileh Montie, Eric W. 2019-01-16 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334970/ http://www.ncbi.nlm.nih.gov/pubmed/30650120 https://doi.org/10.1371/journal.pone.0209914 en eng Public Library of Science http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334970/ http://www.ncbi.nlm.nih.gov/pubmed/30650120 http://dx.doi.org/10.1371/journal.pone.0209914 © 2019 Monczak et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. CC-BY Research Article Text 2019 ftpubmed https://doi.org/10.1371/journal.pone.0209914 2019-02-03T01:29:04Z In the Southeast USA, major contributors to estuarine soundscapes are the courtship calls produced by fish species belonging to the family Sciaenidae. Long-term monitoring of sciaenid courtship sounds may be valuable in understanding reproductive phenology, but this approach produces massive acoustic datasets. With this in mind, we designed a feature-based, signal detector for sciaenid fish calls and tested the efficacy of this detector against manually reviewed data. Acoustic recorders were deployed to collect sound samples for 2 min every 20 min at four stations in the May River estuary, South Carolina, USA from February to November, 2014. Manual analysis of acoustic files revealed that four fish species, belonging to the family Sciaenidae, were the major sound producers in this estuarine soundscape, and included black drum (Pogonias cromis), silver perch (Bairdiella chrysoura), spotted seatrout (Cynoscion nebulosus), and red drum (Sciaenops ocellatus). Recorded calls served as an acoustic library of signature features that were used to create a signal detector to automatically detect, classify, and quantify the number of calls in each acoustic file. Correlation between manual and automatic detection was significant and precision varied from 61% to 100%. Automatic detection provided quantitative data on calling rates for this long-term data set. Positive temperature anomalies increased calling rates of black drum, silver perch, and spotted seatrout, while negative anomalies increased calling rates of red drum. Acoustic monitoring combined with automatic detection could be an additional or alternative method for monitoring sciaenid spawning and changes in phenology associated with climate change. Text Red drum Sciaenops ocellatus PubMed Central (PMC) May River ENVELOPE(-111.369,-111.369,55.717,55.717) PLOS ONE 14 1 e0209914
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Research Article
spellingShingle Research Article
Monczak, Agnieszka
Ji, Yiming
Soueidan, Jamileh
Montie, Eric W.
Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
topic_facet Research Article
description In the Southeast USA, major contributors to estuarine soundscapes are the courtship calls produced by fish species belonging to the family Sciaenidae. Long-term monitoring of sciaenid courtship sounds may be valuable in understanding reproductive phenology, but this approach produces massive acoustic datasets. With this in mind, we designed a feature-based, signal detector for sciaenid fish calls and tested the efficacy of this detector against manually reviewed data. Acoustic recorders were deployed to collect sound samples for 2 min every 20 min at four stations in the May River estuary, South Carolina, USA from February to November, 2014. Manual analysis of acoustic files revealed that four fish species, belonging to the family Sciaenidae, were the major sound producers in this estuarine soundscape, and included black drum (Pogonias cromis), silver perch (Bairdiella chrysoura), spotted seatrout (Cynoscion nebulosus), and red drum (Sciaenops ocellatus). Recorded calls served as an acoustic library of signature features that were used to create a signal detector to automatically detect, classify, and quantify the number of calls in each acoustic file. Correlation between manual and automatic detection was significant and precision varied from 61% to 100%. Automatic detection provided quantitative data on calling rates for this long-term data set. Positive temperature anomalies increased calling rates of black drum, silver perch, and spotted seatrout, while negative anomalies increased calling rates of red drum. Acoustic monitoring combined with automatic detection could be an additional or alternative method for monitoring sciaenid spawning and changes in phenology associated with climate change.
format Text
author Monczak, Agnieszka
Ji, Yiming
Soueidan, Jamileh
Montie, Eric W.
author_facet Monczak, Agnieszka
Ji, Yiming
Soueidan, Jamileh
Montie, Eric W.
author_sort Monczak, Agnieszka
title Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
title_short Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
title_full Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
title_fullStr Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
title_full_unstemmed Automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the Southeast United States
title_sort automatic detection, classification, and quantification of sciaenid fish calls in an estuarine soundscape in the southeast united states
publisher Public Library of Science
publishDate 2019
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334970/
http://www.ncbi.nlm.nih.gov/pubmed/30650120
https://doi.org/10.1371/journal.pone.0209914
long_lat ENVELOPE(-111.369,-111.369,55.717,55.717)
geographic May River
geographic_facet May River
genre Red drum
Sciaenops ocellatus
genre_facet Red drum
Sciaenops ocellatus
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334970/
http://www.ncbi.nlm.nih.gov/pubmed/30650120
http://dx.doi.org/10.1371/journal.pone.0209914
op_rights © 2019 Monczak et al
http://creativecommons.org/licenses/by/4.0/
This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
op_rightsnorm CC-BY
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