Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants
The Planococcus sp. PAMC21323 is a yellow pigment-producing bacterium isolated from King George Island in Antarctica; it has a broad growth temperature range of 5–40 °C. Herein, we describe the complete genome sequence information of the genus Planococcus with its annotated sequence, genetic feature...
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ftpubmed:oai:pubmedcentral.nih.gov:6225704 2023-05-15T13:56:01+02:00 Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants Jung, Jong-Hyun Joe, Min-Ho Kim, Dong-Ho Park, Hyun Choi, Jong-il Lim, Sangyong 2018-11-09 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225704/ http://www.ncbi.nlm.nih.gov/pubmed/30455841 https://doi.org/10.1186/s40793-018-0334-y en eng BioMed Central http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225704/ http://www.ncbi.nlm.nih.gov/pubmed/30455841 http://dx.doi.org/10.1186/s40793-018-0334-y © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. CC0 PDM CC-BY Research Text 2018 ftpubmed https://doi.org/10.1186/s40793-018-0334-y 2018-11-25T01:20:42Z The Planococcus sp. PAMC21323 is a yellow pigment-producing bacterium isolated from King George Island in Antarctica; it has a broad growth temperature range of 5–40 °C. Herein, we describe the complete genome sequence information of the genus Planococcus with its annotated sequence, genetic features for bioremediation, and oxidative stress capacity. The Planococcus sp. PAMC21323 possesses chromosomal DNA (3,196,500-bp) with plasmid DNA (3364-bp). The complete 3,199,864-bp of the genome consists of 3171 genes including 60 transfer RNAs and 24 ribosomal RNAs. Strain PAMC21323 encodes various genes associated with detoxification of heavy metal ions and aromatic hydrocarbons. Moreover, it is equipped with diverse stress response systems, which can be used to sense the internal and oxidative stresses caused by detoxification. This is the first report highlighting the genetic potential of Planococcus sp. PAMC21323 in bioremediation, suggesting application of this psychrotrophic strain in bioremediation in harsh environments. Text Antarc* Antarctica King George Island PubMed Central (PMC) King George Island Standards in Genomic Sciences 13 1 |
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Research Jung, Jong-Hyun Joe, Min-Ho Kim, Dong-Ho Park, Hyun Choi, Jong-il Lim, Sangyong Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
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Research |
description |
The Planococcus sp. PAMC21323 is a yellow pigment-producing bacterium isolated from King George Island in Antarctica; it has a broad growth temperature range of 5–40 °C. Herein, we describe the complete genome sequence information of the genus Planococcus with its annotated sequence, genetic features for bioremediation, and oxidative stress capacity. The Planococcus sp. PAMC21323 possesses chromosomal DNA (3,196,500-bp) with plasmid DNA (3364-bp). The complete 3,199,864-bp of the genome consists of 3171 genes including 60 transfer RNAs and 24 ribosomal RNAs. Strain PAMC21323 encodes various genes associated with detoxification of heavy metal ions and aromatic hydrocarbons. Moreover, it is equipped with diverse stress response systems, which can be used to sense the internal and oxidative stresses caused by detoxification. This is the first report highlighting the genetic potential of Planococcus sp. PAMC21323 in bioremediation, suggesting application of this psychrotrophic strain in bioremediation in harsh environments. |
format |
Text |
author |
Jung, Jong-Hyun Joe, Min-Ho Kim, Dong-Ho Park, Hyun Choi, Jong-il Lim, Sangyong |
author_facet |
Jung, Jong-Hyun Joe, Min-Ho Kim, Dong-Ho Park, Hyun Choi, Jong-il Lim, Sangyong |
author_sort |
Jung, Jong-Hyun |
title |
Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
title_short |
Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
title_full |
Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
title_fullStr |
Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
title_full_unstemmed |
Complete genome sequence of Planococcus sp. PAMC21323 isolated from Antarctica and its metabolic potential to detoxify pollutants |
title_sort |
complete genome sequence of planococcus sp. pamc21323 isolated from antarctica and its metabolic potential to detoxify pollutants |
publisher |
BioMed Central |
publishDate |
2018 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225704/ http://www.ncbi.nlm.nih.gov/pubmed/30455841 https://doi.org/10.1186/s40793-018-0334-y |
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King George Island |
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King George Island |
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Antarc* Antarctica King George Island |
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Antarc* Antarctica King George Island |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225704/ http://www.ncbi.nlm.nih.gov/pubmed/30455841 http://dx.doi.org/10.1186/s40793-018-0334-y |
op_rights |
© The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
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CC0 PDM CC-BY |
op_doi |
https://doi.org/10.1186/s40793-018-0334-y |
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Standards in Genomic Sciences |
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13 |
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1 |
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1766263228170502144 |