Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario

The search for biomarkers of present or past life is one of the major challenges for in situ planetary exploration. Multiple constraints limit the performance and sensitivity of remote in situ instrumentation. In addition, the structure, chemical, and mineralogical composition of the sample may comp...

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Published in:Astrobiology
Main Authors: Blanco, Yolanda, Gallardo-Carreño, Ignacio, Ruiz-Bermejo, Marta, Puente-Sánchez, Fernando, Cavalcante-Silva, Erika, Quesada, Antonio, Prieto-Ballesteros, Olga, Parro, Víctor
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Language:English
Published: Mary Ann Liebert, Inc. 2017
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Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655591/
http://www.ncbi.nlm.nih.gov/pubmed/29016195
https://doi.org/10.1089/ast.2016.1467
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spelling ftpubmed:oai:pubmedcentral.nih.gov:5655591 2023-05-15T13:55:55+02:00 Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario Blanco, Yolanda Gallardo-Carreño, Ignacio Ruiz-Bermejo, Marta Puente-Sánchez, Fernando Cavalcante-Silva, Erika Quesada, Antonio Prieto-Ballesteros, Olga Parro, Víctor 2017-10-01 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655591/ http://www.ncbi.nlm.nih.gov/pubmed/29016195 https://doi.org/10.1089/ast.2016.1467 en eng Mary Ann Liebert, Inc. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655591/ http://www.ncbi.nlm.nih.gov/pubmed/29016195 http://dx.doi.org/10.1089/ast.2016.1467 © Yolanda Blanco et al., 2017; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. CC-BY Research Articles Text 2017 ftpubmed https://doi.org/10.1089/ast.2016.1467 2017-11-05T01:31:28Z The search for biomarkers of present or past life is one of the major challenges for in situ planetary exploration. Multiple constraints limit the performance and sensitivity of remote in situ instrumentation. In addition, the structure, chemical, and mineralogical composition of the sample may complicate the analysis and interpretation of the results. The aim of this work is to highlight the main constraints, performance, and complementarity of several techniques that have already been implemented or are planned to be implemented on Mars for detection of organic and molecular biomarkers on a best-case sample scenario. We analyzed a 1000-year-old desiccated and mummified microbial mat from Antarctica by Raman and IR (infrared) spectroscopies (near- and mid-IR), thermogravimetry (TG), differential thermal analysis, mass spectrometry (MS), and immunological detection with a life detector chip. In spite of the high organic content (ca. 20% wt/wt) of the sample, the Raman spectra only showed the characteristic spectral peaks of the remaining beta-carotene biomarker and faint peaks of phyllosilicates over a strong fluorescence background. IR spectra complemented the mineralogical information from Raman spectra and showed the main molecular vibrations of the humic acid functional groups. The TG-MS system showed the release of several volatile compounds attributed to biopolymers. An antibody microarray for detecting cyanobacteria (CYANOCHIP) detected biomarkers from Chroococcales, Nostocales, and Oscillatoriales orders. The results highlight limitations of each technique and suggest the necessity of complementary approaches in the search for biomarkers because some analytical techniques might be impaired by sample composition, presentation, or processing. Key Words: Planetary exploration—Life detection—Microbial mat—Life detector chip—Thermogravimetry—Raman spectroscopy—NIR—DRIFTS. Astrobiology 17, 984–996. Text Antarc* Antarctica PubMed Central (PMC) Astrobiology 17 10 984 996
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Research Articles
spellingShingle Research Articles
Blanco, Yolanda
Gallardo-Carreño, Ignacio
Ruiz-Bermejo, Marta
Puente-Sánchez, Fernando
Cavalcante-Silva, Erika
Quesada, Antonio
Prieto-Ballesteros, Olga
Parro, Víctor
Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
topic_facet Research Articles
description The search for biomarkers of present or past life is one of the major challenges for in situ planetary exploration. Multiple constraints limit the performance and sensitivity of remote in situ instrumentation. In addition, the structure, chemical, and mineralogical composition of the sample may complicate the analysis and interpretation of the results. The aim of this work is to highlight the main constraints, performance, and complementarity of several techniques that have already been implemented or are planned to be implemented on Mars for detection of organic and molecular biomarkers on a best-case sample scenario. We analyzed a 1000-year-old desiccated and mummified microbial mat from Antarctica by Raman and IR (infrared) spectroscopies (near- and mid-IR), thermogravimetry (TG), differential thermal analysis, mass spectrometry (MS), and immunological detection with a life detector chip. In spite of the high organic content (ca. 20% wt/wt) of the sample, the Raman spectra only showed the characteristic spectral peaks of the remaining beta-carotene biomarker and faint peaks of phyllosilicates over a strong fluorescence background. IR spectra complemented the mineralogical information from Raman spectra and showed the main molecular vibrations of the humic acid functional groups. The TG-MS system showed the release of several volatile compounds attributed to biopolymers. An antibody microarray for detecting cyanobacteria (CYANOCHIP) detected biomarkers from Chroococcales, Nostocales, and Oscillatoriales orders. The results highlight limitations of each technique and suggest the necessity of complementary approaches in the search for biomarkers because some analytical techniques might be impaired by sample composition, presentation, or processing. Key Words: Planetary exploration—Life detection—Microbial mat—Life detector chip—Thermogravimetry—Raman spectroscopy—NIR—DRIFTS. Astrobiology 17, 984–996.
format Text
author Blanco, Yolanda
Gallardo-Carreño, Ignacio
Ruiz-Bermejo, Marta
Puente-Sánchez, Fernando
Cavalcante-Silva, Erika
Quesada, Antonio
Prieto-Ballesteros, Olga
Parro, Víctor
author_facet Blanco, Yolanda
Gallardo-Carreño, Ignacio
Ruiz-Bermejo, Marta
Puente-Sánchez, Fernando
Cavalcante-Silva, Erika
Quesada, Antonio
Prieto-Ballesteros, Olga
Parro, Víctor
author_sort Blanco, Yolanda
title Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
title_short Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
title_full Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
title_fullStr Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
title_full_unstemmed Critical Assessment of Analytical Techniques in the Search for Biomarkers on Mars: A Mummified Microbial Mat from Antarctica as a Best-Case Scenario
title_sort critical assessment of analytical techniques in the search for biomarkers on mars: a mummified microbial mat from antarctica as a best-case scenario
publisher Mary Ann Liebert, Inc.
publishDate 2017
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655591/
http://www.ncbi.nlm.nih.gov/pubmed/29016195
https://doi.org/10.1089/ast.2016.1467
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655591/
http://www.ncbi.nlm.nih.gov/pubmed/29016195
http://dx.doi.org/10.1089/ast.2016.1467
op_rights © Yolanda Blanco et al., 2017; Published by Mary Ann Liebert, Inc.
This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.
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op_doi https://doi.org/10.1089/ast.2016.1467
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