Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden

A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in norther...

Full description

Bibliographic Details
Published in:Viruses
Main Authors: de Miranda, Joachim R., Hedman, Harald, Onorati, Piero, Stephan, Jörg, Karlberg, Olof, Bylund, Helena, Terenius, Olle
Format: Text
Language:English
Published: MDPI 2017
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580471/
https://doi.org/10.3390/v9080214
id ftpubmed:oai:pubmedcentral.nih.gov:5580471
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:5580471 2023-05-15T12:59:11+02:00 Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden de Miranda, Joachim R. Hedman, Harald Onorati, Piero Stephan, Jörg Karlberg, Olof Bylund, Helena Terenius, Olle 2017-08-08 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580471/ https://doi.org/10.3390/v9080214 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580471/ http://dx.doi.org/10.3390/v9080214 © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). CC-BY Communication Text 2017 ftpubmed https://doi.org/10.3390/v9080214 2017-09-10T00:12:27Z A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics. Text Abisko Fennoscandia PubMed Central (PMC) Abisko ENVELOPE(18.829,18.829,68.349,68.349) Viruses 9 8 214
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Communication
spellingShingle Communication
de Miranda, Joachim R.
Hedman, Harald
Onorati, Piero
Stephan, Jörg
Karlberg, Olof
Bylund, Helena
Terenius, Olle
Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
topic_facet Communication
description A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics.
format Text
author de Miranda, Joachim R.
Hedman, Harald
Onorati, Piero
Stephan, Jörg
Karlberg, Olof
Bylund, Helena
Terenius, Olle
author_facet de Miranda, Joachim R.
Hedman, Harald
Onorati, Piero
Stephan, Jörg
Karlberg, Olof
Bylund, Helena
Terenius, Olle
author_sort de Miranda, Joachim R.
title Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_short Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_full Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_fullStr Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_full_unstemmed Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_sort characterization of a novel rna virus discovered in the autumnal moth epirrita autumnata in sweden
publisher MDPI
publishDate 2017
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580471/
https://doi.org/10.3390/v9080214
long_lat ENVELOPE(18.829,18.829,68.349,68.349)
geographic Abisko
geographic_facet Abisko
genre Abisko
Fennoscandia
genre_facet Abisko
Fennoscandia
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580471/
http://dx.doi.org/10.3390/v9080214
op_rights © 2017 by the authors.
Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/v9080214
container_title Viruses
container_volume 9
container_issue 8
container_start_page 214
_version_ 1766361024648183808