Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds

In the transition zone of the shifting permafrost border, thaw ponds emerge as hotspots of microbial activity, processing the ancient carbon freed from the permafrost. We analyzed the microbial succession across a gradient of recently emerged to older ponds using three molecular markers: one univers...

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Published in:The ISME Journal
Main Authors: Wurzbacher, Christian, Nilsson, R Henrik, Rautio, Milla, Peura, Sari
Format: Text
Language:English
Published: Nature Publishing Group 2017
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520041/
http://www.ncbi.nlm.nih.gov/pubmed/28430187
https://doi.org/10.1038/ismej.2017.54
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spelling ftpubmed:oai:pubmedcentral.nih.gov:5520041 2023-05-15T17:55:49+02:00 Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds Wurzbacher, Christian Nilsson, R Henrik Rautio, Milla Peura, Sari 2017-08 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520041/ http://www.ncbi.nlm.nih.gov/pubmed/28430187 https://doi.org/10.1038/ismej.2017.54 en eng Nature Publishing Group http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520041/ http://www.ncbi.nlm.nih.gov/pubmed/28430187 http://dx.doi.org/10.1038/ismej.2017.54 Copyright © 2017 International Society for Microbial Ecology Short Communication Text 2017 ftpubmed https://doi.org/10.1038/ismej.2017.54 2018-08-05T00:10:03Z In the transition zone of the shifting permafrost border, thaw ponds emerge as hotspots of microbial activity, processing the ancient carbon freed from the permafrost. We analyzed the microbial succession across a gradient of recently emerged to older ponds using three molecular markers: one universal, one bacterial and one fungal. Age was a major modulator of the microbial community of the thaw ponds. Surprisingly, typical freshwater taxa comprised only a small fraction of the community. Instead, thaw ponds of all age classes were dominated by enigmatic bacterial and fungal phyla. Our results on permafrost thaw ponds lead to a revised perception of the thaw pond ecosystem and their microbes, with potential implications for carbon and nutrient cycling in this increasingly important class of freshwaters. Text permafrost PubMed Central (PMC) Freed ENVELOPE(164.333,164.333,-71.483,-71.483) The ISME Journal 11 8 1938 1941
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Short Communication
spellingShingle Short Communication
Wurzbacher, Christian
Nilsson, R Henrik
Rautio, Milla
Peura, Sari
Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
topic_facet Short Communication
description In the transition zone of the shifting permafrost border, thaw ponds emerge as hotspots of microbial activity, processing the ancient carbon freed from the permafrost. We analyzed the microbial succession across a gradient of recently emerged to older ponds using three molecular markers: one universal, one bacterial and one fungal. Age was a major modulator of the microbial community of the thaw ponds. Surprisingly, typical freshwater taxa comprised only a small fraction of the community. Instead, thaw ponds of all age classes were dominated by enigmatic bacterial and fungal phyla. Our results on permafrost thaw ponds lead to a revised perception of the thaw pond ecosystem and their microbes, with potential implications for carbon and nutrient cycling in this increasingly important class of freshwaters.
format Text
author Wurzbacher, Christian
Nilsson, R Henrik
Rautio, Milla
Peura, Sari
author_facet Wurzbacher, Christian
Nilsson, R Henrik
Rautio, Milla
Peura, Sari
author_sort Wurzbacher, Christian
title Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
title_short Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
title_full Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
title_fullStr Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
title_full_unstemmed Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
title_sort poorly known microbial taxa dominate the microbiome of permafrost thaw ponds
publisher Nature Publishing Group
publishDate 2017
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520041/
http://www.ncbi.nlm.nih.gov/pubmed/28430187
https://doi.org/10.1038/ismej.2017.54
long_lat ENVELOPE(164.333,164.333,-71.483,-71.483)
geographic Freed
geographic_facet Freed
genre permafrost
genre_facet permafrost
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520041/
http://www.ncbi.nlm.nih.gov/pubmed/28430187
http://dx.doi.org/10.1038/ismej.2017.54
op_rights Copyright © 2017 International Society for Microbial Ecology
op_doi https://doi.org/10.1038/ismej.2017.54
container_title The ISME Journal
container_volume 11
container_issue 8
container_start_page 1938
op_container_end_page 1941
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