Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper)
The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species' range. Microsatellite loci were developed de novo and...
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ftpubmed:oai:pubmedcentral.nih.gov:5210689 2023-05-15T17:41:23+02:00 Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) Farrell, Edward D. Carlsson, Jeanette E. L. Carlsson, Jens 2016-12-14 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210689/ https://doi.org/10.1098/rsos.160651 en eng The Royal Society Publishing http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210689/ http://dx.doi.org/10.1098/rsos.160651 © 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. CC-BY Biology (Whole Organism) Text 2016 ftpubmed https://doi.org/10.1098/rsos.160651 2017-01-15T01:05:04Z The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species' range. Microsatellite loci were developed de novo and genotyped by next-generation sequencing. Genetic analyses of the samples indicated that boarfish can be subdivided into at least seven biological units (populations) across the species' range. Furthermore, the recent apparent increase in abundance in the northeast Atlantic is better explained by demographic changes within this area than by influx from southern or insular populations. This study clearly shows that the microsatellite GBS approach is a generic, cost-effective, rapid and powerful method suitable for full-scale population genetic studies—a crucial element for assessment, sustainable management and conservation of valuable biological resources. Text Northeast Atlantic PubMed Central (PMC) Royal Society Open Science 3 12 160651 |
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PubMed Central (PMC) |
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ftpubmed |
language |
English |
topic |
Biology (Whole Organism) |
spellingShingle |
Biology (Whole Organism) Farrell, Edward D. Carlsson, Jeanette E. L. Carlsson, Jens Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
topic_facet |
Biology (Whole Organism) |
description |
The recently developed approach for microsatellite genotyping by sequencing (GBS) using individual combinatorial barcoding was further improved and used to assess the genetic population structure of boarfish (Capros aper) across the species' range. Microsatellite loci were developed de novo and genotyped by next-generation sequencing. Genetic analyses of the samples indicated that boarfish can be subdivided into at least seven biological units (populations) across the species' range. Furthermore, the recent apparent increase in abundance in the northeast Atlantic is better explained by demographic changes within this area than by influx from southern or insular populations. This study clearly shows that the microsatellite GBS approach is a generic, cost-effective, rapid and powerful method suitable for full-scale population genetic studies—a crucial element for assessment, sustainable management and conservation of valuable biological resources. |
format |
Text |
author |
Farrell, Edward D. Carlsson, Jeanette E. L. Carlsson, Jens |
author_facet |
Farrell, Edward D. Carlsson, Jeanette E. L. Carlsson, Jens |
author_sort |
Farrell, Edward D. |
title |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_short |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_full |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_fullStr |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_full_unstemmed |
Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper) |
title_sort |
next gen pop gen: implementing a high-throughput approach to population genetics in boarfish (capros aper) |
publisher |
The Royal Society Publishing |
publishDate |
2016 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210689/ https://doi.org/10.1098/rsos.160651 |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210689/ http://dx.doi.org/10.1098/rsos.160651 |
op_rights |
© 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1098/rsos.160651 |
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Royal Society Open Science |
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3 |
container_issue |
12 |
container_start_page |
160651 |
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1766142916676288512 |