Bacterial Community Structures in Freshwater Polar Environments of Svalbard

Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to rev...

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Published in:Microbes and environments
Main Authors: Ntougias, Spyridon, Polkowska, Żaneta, Nikolaki, Sofia, Dionyssopoulou, Eva, Stathopoulou, Panagiota, Doudoumis, Vangelis, Ruman, Marek, Kozak, Katarzyna, Namieśnik, Jacek, Tsiamis, George
Format: Text
Language:English
Published: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/
http://www.ncbi.nlm.nih.gov/pubmed/27725345
https://doi.org/10.1264/jsme2.ME16074
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spelling ftpubmed:oai:pubmedcentral.nih.gov:5158112 2023-05-15T15:07:01+02:00 Bacterial Community Structures in Freshwater Polar Environments of Svalbard Ntougias, Spyridon Polkowska, Żaneta Nikolaki, Sofia Dionyssopoulou, Eva Stathopoulou, Panagiota Doudoumis, Vangelis Ruman, Marek Kozak, Katarzyna Namieśnik, Jacek Tsiamis, George 2016-12 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/ http://www.ncbi.nlm.nih.gov/pubmed/27725345 https://doi.org/10.1264/jsme2.ME16074 en eng the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/ http://www.ncbi.nlm.nih.gov/pubmed/27725345 http://dx.doi.org/10.1264/jsme2.ME16074 Copyright © 2016 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. CC-BY Articles Text 2016 ftpubmed https://doi.org/10.1264/jsme2.ME16074 2016-12-25T01:08:15Z Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to reveal bacterial community structures in stream and lake surface water samples from the Fuglebekken and Revvatnet basins of southern Svalbard. Depending on the samples examined, bacterial communities at a higher taxonomic level mainly consisted either of Bacteroidetes, Betaproteobacteria, and Microgenomates (OP11) or Planctomycetes, Betaproteobacteria, and Bacteroidetes members, whereas a population of Microgenomates was prominent in 2 samples. At the lower taxonomic level, bacterial communities mostly comprised Microgenomates, Comamonadaceae, Flavobacteriaceae, Legionellales, SM2F11, Parcubacteria (OD1), and TM7 members at different proportions in each sample. The abundance of OTUs shared in common among samples was greater than 70%, with the exception of samples in which the proliferation of Planctomycetaceae, Phycisphaeraceae, and Candidatus Methylacidiphilum spp. lowered their relative abundance. A multi-variable analysis indicated that As, Pb, and Sb were the main environmental factors influencing bacterial profiles. We concluded that the bacterial communities in the polar aquatic ecosystems examined mainly consisted of freshwater and marine microorganisms involved in detritus mineralization, with a high proportion of zooplankton-associated taxa also being identified. Text Arctic Svalbard Zooplankton PubMed Central (PMC) Arctic Revvatnet ENVELOPE(15.394,15.394,77.021,77.021) Svalbard Svalbard Archipelago Microbes and environments 31 4 401 409
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Articles
spellingShingle Articles
Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
Bacterial Community Structures in Freshwater Polar Environments of Svalbard
topic_facet Articles
description Two thirds of Svalbard archipelago islands in the High Arctic are permanently covered with glacial ice and snow. Polar bacterial communities in the southern part of Svalbard were characterized using an amplicon sequencing approach. A total of 52,928 pyrosequencing reads were analyzed in order to reveal bacterial community structures in stream and lake surface water samples from the Fuglebekken and Revvatnet basins of southern Svalbard. Depending on the samples examined, bacterial communities at a higher taxonomic level mainly consisted either of Bacteroidetes, Betaproteobacteria, and Microgenomates (OP11) or Planctomycetes, Betaproteobacteria, and Bacteroidetes members, whereas a population of Microgenomates was prominent in 2 samples. At the lower taxonomic level, bacterial communities mostly comprised Microgenomates, Comamonadaceae, Flavobacteriaceae, Legionellales, SM2F11, Parcubacteria (OD1), and TM7 members at different proportions in each sample. The abundance of OTUs shared in common among samples was greater than 70%, with the exception of samples in which the proliferation of Planctomycetaceae, Phycisphaeraceae, and Candidatus Methylacidiphilum spp. lowered their relative abundance. A multi-variable analysis indicated that As, Pb, and Sb were the main environmental factors influencing bacterial profiles. We concluded that the bacterial communities in the polar aquatic ecosystems examined mainly consisted of freshwater and marine microorganisms involved in detritus mineralization, with a high proportion of zooplankton-associated taxa also being identified.
format Text
author Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
author_facet Ntougias, Spyridon
Polkowska, Żaneta
Nikolaki, Sofia
Dionyssopoulou, Eva
Stathopoulou, Panagiota
Doudoumis, Vangelis
Ruman, Marek
Kozak, Katarzyna
Namieśnik, Jacek
Tsiamis, George
author_sort Ntougias, Spyridon
title Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_short Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_full Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_fullStr Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_full_unstemmed Bacterial Community Structures in Freshwater Polar Environments of Svalbard
title_sort bacterial community structures in freshwater polar environments of svalbard
publisher the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI)
publishDate 2016
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/
http://www.ncbi.nlm.nih.gov/pubmed/27725345
https://doi.org/10.1264/jsme2.ME16074
long_lat ENVELOPE(15.394,15.394,77.021,77.021)
geographic Arctic
Revvatnet
Svalbard
Svalbard Archipelago
geographic_facet Arctic
Revvatnet
Svalbard
Svalbard Archipelago
genre Arctic
Svalbard
Zooplankton
genre_facet Arctic
Svalbard
Zooplankton
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158112/
http://www.ncbi.nlm.nih.gov/pubmed/27725345
http://dx.doi.org/10.1264/jsme2.ME16074
op_rights Copyright © 2016 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions.
http://creativecommons.org/licenses/by/3.0/
This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
op_rightsnorm CC-BY
op_doi https://doi.org/10.1264/jsme2.ME16074
container_title Microbes and environments
container_volume 31
container_issue 4
container_start_page 401
op_container_end_page 409
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