Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area
The knowledge of population structure of a species is essential to effectively assess and manage fisheries. In the present study, genetics, by mitochondrial DNA cytochrome b sequence analysis, and body geometric morphometrics were used to evaluate the existence of distinct populations of the forkbea...
Published in: | PLOS ONE |
---|---|
Main Authors: | , , , , , , |
Format: | Text |
Language: | English |
Published: |
Public Library of Science
2016
|
Subjects: | |
Online Access: | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152830/ http://www.ncbi.nlm.nih.gov/pubmed/27941988 https://doi.org/10.1371/journal.pone.0167045 |
id |
ftpubmed:oai:pubmedcentral.nih.gov:5152830 |
---|---|
record_format |
openpolar |
spelling |
ftpubmed:oai:pubmedcentral.nih.gov:5152830 2023-05-15T17:41:05+02:00 Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area Vieira, Ana Rita Rodrigues, Ana Sofia B. Sequeira, Vera Neves, Ana Paiva, Rafaela Barros Paulo, Octávio S. Gordo, Leonel Serrano 2016-12-12 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152830/ http://www.ncbi.nlm.nih.gov/pubmed/27941988 https://doi.org/10.1371/journal.pone.0167045 en eng Public Library of Science http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152830/ http://www.ncbi.nlm.nih.gov/pubmed/27941988 http://dx.doi.org/10.1371/journal.pone.0167045 © 2016 Vieira et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. CC-BY Research Article Text 2016 ftpubmed https://doi.org/10.1371/journal.pone.0167045 2017-01-01T01:01:23Z The knowledge of population structure of a species is essential to effectively assess and manage fisheries. In the present study, genetics, by mitochondrial DNA cytochrome b sequence analysis, and body geometric morphometrics were used to evaluate the existence of distinct populations of the forkbeard (Phycis phycis), an important commercial species in several European countries, especially Portugal and Spain. For geometric morphometric analysis, specimens were collected in the Northeast Atlantic Ocean—Azores, Madeira and mainland Portugal, and for genetic analysis, these samples were complemented with samples collected in the Mediterranean Sea—Spain, Italy and Croatia, in order to cover the entire distribution area of the species. Body shape of the forkbeard from the Northeast Atlantic was found to be highly variable. This variation was probably associated with different environmental factors between the study areas. Despite morphological variation, a low genetic differentiation between samples from different areas was found, most likely due to gene flow that occurred in the past or with the demographic history of the species. Moreover, the presence of unique haplotypes in the Northeast Atlantic and in the Mediterranean suggests that recent gene flow between populations from these areas should be limited. Altogether, a high haplotype diversity, a low nucleotide diversity, a “star-like” network and the results of the mismatch distribution, indicate a possible signature of recent population expansions, which probably started during the end of the Last Glacial Maximum and led to the colonization of the Northeast Atlantic and the Mediterranean. Text Northeast Atlantic PubMed Central (PMC) PLOS ONE 11 12 e0167045 |
institution |
Open Polar |
collection |
PubMed Central (PMC) |
op_collection_id |
ftpubmed |
language |
English |
topic |
Research Article |
spellingShingle |
Research Article Vieira, Ana Rita Rodrigues, Ana Sofia B. Sequeira, Vera Neves, Ana Paiva, Rafaela Barros Paulo, Octávio S. Gordo, Leonel Serrano Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
topic_facet |
Research Article |
description |
The knowledge of population structure of a species is essential to effectively assess and manage fisheries. In the present study, genetics, by mitochondrial DNA cytochrome b sequence analysis, and body geometric morphometrics were used to evaluate the existence of distinct populations of the forkbeard (Phycis phycis), an important commercial species in several European countries, especially Portugal and Spain. For geometric morphometric analysis, specimens were collected in the Northeast Atlantic Ocean—Azores, Madeira and mainland Portugal, and for genetic analysis, these samples were complemented with samples collected in the Mediterranean Sea—Spain, Italy and Croatia, in order to cover the entire distribution area of the species. Body shape of the forkbeard from the Northeast Atlantic was found to be highly variable. This variation was probably associated with different environmental factors between the study areas. Despite morphological variation, a low genetic differentiation between samples from different areas was found, most likely due to gene flow that occurred in the past or with the demographic history of the species. Moreover, the presence of unique haplotypes in the Northeast Atlantic and in the Mediterranean suggests that recent gene flow between populations from these areas should be limited. Altogether, a high haplotype diversity, a low nucleotide diversity, a “star-like” network and the results of the mismatch distribution, indicate a possible signature of recent population expansions, which probably started during the end of the Last Glacial Maximum and led to the colonization of the Northeast Atlantic and the Mediterranean. |
format |
Text |
author |
Vieira, Ana Rita Rodrigues, Ana Sofia B. Sequeira, Vera Neves, Ana Paiva, Rafaela Barros Paulo, Octávio S. Gordo, Leonel Serrano |
author_facet |
Vieira, Ana Rita Rodrigues, Ana Sofia B. Sequeira, Vera Neves, Ana Paiva, Rafaela Barros Paulo, Octávio S. Gordo, Leonel Serrano |
author_sort |
Vieira, Ana Rita |
title |
Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
title_short |
Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
title_full |
Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
title_fullStr |
Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
title_full_unstemmed |
Genetic and Morphological Variation of the Forkbeard, Phycis phycis (Pisces, Phycidae): Evidence of Panmixia and Recent Population Expansion along Its Distribution Area |
title_sort |
genetic and morphological variation of the forkbeard, phycis phycis (pisces, phycidae): evidence of panmixia and recent population expansion along its distribution area |
publisher |
Public Library of Science |
publishDate |
2016 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152830/ http://www.ncbi.nlm.nih.gov/pubmed/27941988 https://doi.org/10.1371/journal.pone.0167045 |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152830/ http://www.ncbi.nlm.nih.gov/pubmed/27941988 http://dx.doi.org/10.1371/journal.pone.0167045 |
op_rights |
© 2016 Vieira et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0167045 |
container_title |
PLOS ONE |
container_volume |
11 |
container_issue |
12 |
container_start_page |
e0167045 |
_version_ |
1766142314358505472 |