Multilocus Sequence Analysis of Close Relatives Vibrio anguillarum and Vibrio ordalii

• Published in: Applied and Environmental Microbiology
• Main Authors: Steinum, Terje M., Karataş, Süheyla, Martinussen, Nora Tandstad, Meirelles, Pedro M., Thompson, Fabiano L., Colquhoun, Duncan J.
• Format: Text
• Language: English
• Published: American Society for Microbiology 2016
• Subjects: Genetics and Molecular Biology; Norway; atlantic cod
• Online Access: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5007779/; http://www.ncbi.nlm.nih.gov/pubmed/27371582; https://doi.org/10.1128/AEM.00620-16

The genetic heterogeneity of the close relatives Vibrio anguillarum and Vibrio ordalii, both serious pathogens of fish causing extensive losses in aquaculture, was studied. Eight housekeeping genes, i.e., atpA, ftsZ, gapA, gyrB, mreB, rpoA, topA, and pyrH, were partially sequenced in 116 isolates from diverse fish species and geographical areas. The eight genes appear to be under purifying selection, and the genetic diversity in the total data set was estimated to be 0.767 ± 0.026. Our multilocus sequence analysis (MLSA) scheme identified several widespread clonal complexes and resolved the isolates, for the most part, according to serotype. Serotype O2b isolates from diseased cod in Norway, Ireland, and Scotland were found to be extremely homogeneous. Horizontal gene transfer appears to be fairly common within and between clonal complexes. Taken together, MLSA and in silico DNA-DNA hybridization (DDH) calculations suggest that some isolates previously characterized as V. ordalii, i.e., 12B09, FF93, FS144, and FS238, are in fact V. anguillarum isolates. The precise taxonomic situation for two isolates from Atlantic cod that display several traits consistent with V. ordalii, i.e., NVI 5286 and NVI 5918, and a single environmental strain that was previously considered to represent V. ordalii, i.e., FF167, is less clear.