Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis)
Here, we provide the dataset associated with our research article on the potential effects of ocean acidification on antimicrobial peptide (AMP) activity in the gills of Mytilus edulis, “Impact of ocean acidification on antimicrobial activity in gills of the blue mussel (Mytilus edulis)” [1]. Blue m...
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ftpubmed:oai:pubmedcentral.nih.gov:4915946 2023-05-15T17:49:56+02:00 Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) Hörnaeus, K. Guillemant, J. Mi, J. Hernroth, B. Bergquist, J. Lind, S. Bergström 2016-06-03 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915946/ https://doi.org/10.1016/j.dib.2016.05.073 en eng Elsevier http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915946/ http://dx.doi.org/10.1016/j.dib.2016.05.073 © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). CC-BY Data Article Text 2016 ftpubmed https://doi.org/10.1016/j.dib.2016.05.073 2016-07-03T00:23:51Z Here, we provide the dataset associated with our research article on the potential effects of ocean acidification on antimicrobial peptide (AMP) activity in the gills of Mytilus edulis, “Impact of ocean acidification on antimicrobial activity in gills of the blue mussel (Mytilus edulis)” [1]. Blue mussels were stimulated with lipopolysaccharides and samples were collected at different time points post injection. Protein extracts were prepared from the gills, digested using trypsin and a full in-depth proteome investigation was performed using liquid chromatography coupled to tandem mass spectrometry (LC–MS/MS). Protein identification and quantification was performed using the MaxQuant 1.5.1.2 software, “MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification” [2]. Text Ocean acidification PubMed Central (PMC) Data in Brief 8 470 473 |
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Data Article Hörnaeus, K. Guillemant, J. Mi, J. Hernroth, B. Bergquist, J. Lind, S. Bergström Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
topic_facet |
Data Article |
description |
Here, we provide the dataset associated with our research article on the potential effects of ocean acidification on antimicrobial peptide (AMP) activity in the gills of Mytilus edulis, “Impact of ocean acidification on antimicrobial activity in gills of the blue mussel (Mytilus edulis)” [1]. Blue mussels were stimulated with lipopolysaccharides and samples were collected at different time points post injection. Protein extracts were prepared from the gills, digested using trypsin and a full in-depth proteome investigation was performed using liquid chromatography coupled to tandem mass spectrometry (LC–MS/MS). Protein identification and quantification was performed using the MaxQuant 1.5.1.2 software, “MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification” [2]. |
format |
Text |
author |
Hörnaeus, K. Guillemant, J. Mi, J. Hernroth, B. Bergquist, J. Lind, S. Bergström |
author_facet |
Hörnaeus, K. Guillemant, J. Mi, J. Hernroth, B. Bergquist, J. Lind, S. Bergström |
author_sort |
Hörnaeus, K. |
title |
Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
title_short |
Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
title_full |
Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
title_fullStr |
Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
title_full_unstemmed |
Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis) |
title_sort |
mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (mytilus edulis) |
publisher |
Elsevier |
publishDate |
2016 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915946/ https://doi.org/10.1016/j.dib.2016.05.073 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915946/ http://dx.doi.org/10.1016/j.dib.2016.05.073 |
op_rights |
© 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1016/j.dib.2016.05.073 |
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Data in Brief |
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8 |
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470 |
op_container_end_page |
473 |
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1766156464971317248 |