Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing

This study assessed the diversity and distribution of fungal communities associated with seven lichen species in the Ny-Ålesund Region (Svalbard, High Arctic) using Roche 454 pyrosequencing with fungal-specific primers targeting the internal transcribed spacer (ITS) region of the ribosomal rRNA gene...

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Published in:Scientific Reports
Main Authors: Zhang, Tao, Wei, Xin-Li, Zhang, Yu-Qin, Liu, Hong-Yu, Yu, Li-Yan
Format: Text
Language:English
Published: Nature Publishing Group 2015
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604449/
http://www.ncbi.nlm.nih.gov/pubmed/26463847
https://doi.org/10.1038/srep14850
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spelling ftpubmed:oai:pubmedcentral.nih.gov:4604449 2023-05-15T14:01:10+02:00 Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing Zhang, Tao Wei, Xin-Li Zhang, Yu-Qin Liu, Hong-Yu Yu, Li-Yan 2015-10-14 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604449/ http://www.ncbi.nlm.nih.gov/pubmed/26463847 https://doi.org/10.1038/srep14850 en eng Nature Publishing Group http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604449/ http://www.ncbi.nlm.nih.gov/pubmed/26463847 http://dx.doi.org/10.1038/srep14850 Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ CC-BY Article Text 2015 ftpubmed https://doi.org/10.1038/srep14850 2015-12-13T01:12:54Z This study assessed the diversity and distribution of fungal communities associated with seven lichen species in the Ny-Ålesund Region (Svalbard, High Arctic) using Roche 454 pyrosequencing with fungal-specific primers targeting the internal transcribed spacer (ITS) region of the ribosomal rRNA gene. Lichen-associated fungal communities showed high diversity, with a total of 42,259 reads belonging to 370 operational taxonomic units (OTUs) being found. Of these OTUs, 294 belonged to Ascomycota, 54 to Basidiomycota, 2 to Zygomycota, and 20 to unknown fungi. Leotiomycetes, Dothideomycetes, and Eurotiomycetes were the major classes, whereas the dominant orders were Helotiales, Capnodiales, and Chaetothyriales. Interestingly, most fungal OTUs were closely related to fungi from various habitats (e.g., soil, rock, plant tissues) in the Arctic, Antarctic and alpine regions, which suggests that living in association with lichen thalli may be a transient stage of life cycle for these fungi and that long-distance dispersal may be important to the fungi in the Arctic. In addition, host-related factors shaped the lichen-associated fungal communities in this region. Taken together, these results suggest that lichens thalli act as reservoirs of diverse fungi from various niches, which may improve our understanding of fungal evolution and ecology in the Arctic. Text Antarc* Antarctic Arctic Ny Ålesund Ny-Ålesund Svalbard PubMed Central (PMC) Antarctic Arctic Ny-Ålesund Svalbard Scientific Reports 5 1
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Zhang, Tao
Wei, Xin-Li
Zhang, Yu-Qin
Liu, Hong-Yu
Yu, Li-Yan
Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
topic_facet Article
description This study assessed the diversity and distribution of fungal communities associated with seven lichen species in the Ny-Ålesund Region (Svalbard, High Arctic) using Roche 454 pyrosequencing with fungal-specific primers targeting the internal transcribed spacer (ITS) region of the ribosomal rRNA gene. Lichen-associated fungal communities showed high diversity, with a total of 42,259 reads belonging to 370 operational taxonomic units (OTUs) being found. Of these OTUs, 294 belonged to Ascomycota, 54 to Basidiomycota, 2 to Zygomycota, and 20 to unknown fungi. Leotiomycetes, Dothideomycetes, and Eurotiomycetes were the major classes, whereas the dominant orders were Helotiales, Capnodiales, and Chaetothyriales. Interestingly, most fungal OTUs were closely related to fungi from various habitats (e.g., soil, rock, plant tissues) in the Arctic, Antarctic and alpine regions, which suggests that living in association with lichen thalli may be a transient stage of life cycle for these fungi and that long-distance dispersal may be important to the fungi in the Arctic. In addition, host-related factors shaped the lichen-associated fungal communities in this region. Taken together, these results suggest that lichens thalli act as reservoirs of diverse fungi from various niches, which may improve our understanding of fungal evolution and ecology in the Arctic.
format Text
author Zhang, Tao
Wei, Xin-Li
Zhang, Yu-Qin
Liu, Hong-Yu
Yu, Li-Yan
author_facet Zhang, Tao
Wei, Xin-Li
Zhang, Yu-Qin
Liu, Hong-Yu
Yu, Li-Yan
author_sort Zhang, Tao
title Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
title_short Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
title_full Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
title_fullStr Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
title_full_unstemmed Diversity and distribution of lichen-associated fungi in the Ny-Ålesund Region (Svalbard, High Arctic) as revealed by 454 pyrosequencing
title_sort diversity and distribution of lichen-associated fungi in the ny-ålesund region (svalbard, high arctic) as revealed by 454 pyrosequencing
publisher Nature Publishing Group
publishDate 2015
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604449/
http://www.ncbi.nlm.nih.gov/pubmed/26463847
https://doi.org/10.1038/srep14850
geographic Antarctic
Arctic
Ny-Ålesund
Svalbard
geographic_facet Antarctic
Arctic
Ny-Ålesund
Svalbard
genre Antarc*
Antarctic
Arctic
Ny Ålesund
Ny-Ålesund
Svalbard
genre_facet Antarc*
Antarctic
Arctic
Ny Ålesund
Ny-Ålesund
Svalbard
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604449/
http://www.ncbi.nlm.nih.gov/pubmed/26463847
http://dx.doi.org/10.1038/srep14850
op_rights Copyright © 2015, Macmillan Publishers Limited
http://creativecommons.org/licenses/by/4.0/
This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
op_rightsnorm CC-BY
op_doi https://doi.org/10.1038/srep14850
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