Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds

The numerous perennial meltwater ponds distributed throughout Antarctica represent diverse and productive ecosystems central to the ecological functioning of the surrounding ultra oligotrophic environment. The dominant taxa in the pond benthic communities have been well described however, little is...

Full description

Bibliographic Details
Published in:Frontiers in Microbiology
Main Authors: Archer, Stephen D. J., McDonald, Ian R., Herbold, Craig W., Lee, Charles K., Cary, Craig S.
Format: Text
Language:English
Published: Frontiers Media S.A. 2015
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444838/
https://doi.org/10.3389/fmicb.2015.00485
id ftpubmed:oai:pubmedcentral.nih.gov:4444838
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:4444838 2023-05-15T13:34:50+02:00 Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds Archer, Stephen D. J. McDonald, Ian R. Herbold, Craig W. Lee, Charles K. Cary, Craig S. 2015-05-27 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444838/ https://doi.org/10.3389/fmicb.2015.00485 en eng Frontiers Media S.A. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444838/ http://dx.doi.org/10.3389/fmicb.2015.00485 Copyright © 2015 Archer, McDonald, Herbold, Lee and Cary. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. CC-BY Microbiology Text 2015 ftpubmed https://doi.org/10.3389/fmicb.2015.00485 2015-06-14T00:03:24Z The numerous perennial meltwater ponds distributed throughout Antarctica represent diverse and productive ecosystems central to the ecological functioning of the surrounding ultra oligotrophic environment. The dominant taxa in the pond benthic communities have been well described however, little is known regarding their regional dispersal and local drivers to community structure. The benthic microbial communities of 12 meltwater ponds in the McMurdo Sound of Antarctica were investigated to examine variation between pond microbial communities and their biogeography. Geochemically comparable but geomorphologically distinct ponds were selected from Bratina Island (ice shelf) and Miers Valley (terrestrial) (<40 km between study sites), and community structure within ponds was compared using DNA fingerprinting and pyrosequencing of 16S rRNA gene amplicons. More than 85% of total sequence reads were shared between pooled benthic communities at different locations (OTU0.05), which in combination with favorable prevailing winds suggests aeolian regional distribution. Consistent with previous findings Proteobacteria and Bacteroidetes were the dominant phyla representing over 50% of total sequences; however, a large number of other phyla (21) were also detected in this ecosystem. Although dominant Bacteria were ubiquitous between ponds, site and local selection resulted in heterogeneous community structures and with more than 45% of diversity being pond specific. Potassium was identified as the most significant contributing factor to the cosmopolitan community structure and aluminum to the location unique community based on a BEST analysis (Spearman's correlation coefficient of 0.632 and 0.806, respectively). These results indicate that the microbial communities in meltwater ponds are easily dispersed regionally and that the local geochemical environment drives the ponds community structure. Text Antarc* Antarctic Antarctica Bratina Island Ice Shelf McMurdo Sound PubMed Central (PMC) Antarctic Bratina Island ENVELOPE(165.533,165.533,-78.017,-78.017) McMurdo Sound Miers ENVELOPE(163.850,163.850,-78.100,-78.100) Miers Valley ENVELOPE(164.200,164.200,-78.100,-78.100) Frontiers in Microbiology 6
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Microbiology
spellingShingle Microbiology
Archer, Stephen D. J.
McDonald, Ian R.
Herbold, Craig W.
Lee, Charles K.
Cary, Craig S.
Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
topic_facet Microbiology
description The numerous perennial meltwater ponds distributed throughout Antarctica represent diverse and productive ecosystems central to the ecological functioning of the surrounding ultra oligotrophic environment. The dominant taxa in the pond benthic communities have been well described however, little is known regarding their regional dispersal and local drivers to community structure. The benthic microbial communities of 12 meltwater ponds in the McMurdo Sound of Antarctica were investigated to examine variation between pond microbial communities and their biogeography. Geochemically comparable but geomorphologically distinct ponds were selected from Bratina Island (ice shelf) and Miers Valley (terrestrial) (<40 km between study sites), and community structure within ponds was compared using DNA fingerprinting and pyrosequencing of 16S rRNA gene amplicons. More than 85% of total sequence reads were shared between pooled benthic communities at different locations (OTU0.05), which in combination with favorable prevailing winds suggests aeolian regional distribution. Consistent with previous findings Proteobacteria and Bacteroidetes were the dominant phyla representing over 50% of total sequences; however, a large number of other phyla (21) were also detected in this ecosystem. Although dominant Bacteria were ubiquitous between ponds, site and local selection resulted in heterogeneous community structures and with more than 45% of diversity being pond specific. Potassium was identified as the most significant contributing factor to the cosmopolitan community structure and aluminum to the location unique community based on a BEST analysis (Spearman's correlation coefficient of 0.632 and 0.806, respectively). These results indicate that the microbial communities in meltwater ponds are easily dispersed regionally and that the local geochemical environment drives the ponds community structure.
format Text
author Archer, Stephen D. J.
McDonald, Ian R.
Herbold, Craig W.
Lee, Charles K.
Cary, Craig S.
author_facet Archer, Stephen D. J.
McDonald, Ian R.
Herbold, Craig W.
Lee, Charles K.
Cary, Craig S.
author_sort Archer, Stephen D. J.
title Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
title_short Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
title_full Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
title_fullStr Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
title_full_unstemmed Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds
title_sort benthic microbial communities of coastal terrestrial and ice shelf antarctic meltwater ponds
publisher Frontiers Media S.A.
publishDate 2015
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444838/
https://doi.org/10.3389/fmicb.2015.00485
long_lat ENVELOPE(165.533,165.533,-78.017,-78.017)
ENVELOPE(163.850,163.850,-78.100,-78.100)
ENVELOPE(164.200,164.200,-78.100,-78.100)
geographic Antarctic
Bratina Island
McMurdo Sound
Miers
Miers Valley
geographic_facet Antarctic
Bratina Island
McMurdo Sound
Miers
Miers Valley
genre Antarc*
Antarctic
Antarctica
Bratina Island
Ice Shelf
McMurdo Sound
genre_facet Antarc*
Antarctic
Antarctica
Bratina Island
Ice Shelf
McMurdo Sound
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444838/
http://dx.doi.org/10.3389/fmicb.2015.00485
op_rights Copyright © 2015 Archer, McDonald, Herbold, Lee and Cary.
http://creativecommons.org/licenses/by/4.0/
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2015.00485
container_title Frontiers in Microbiology
container_volume 6
_version_ 1766058441366831104