Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model

Predicting space use patterns of animals from their interactions with the environment is fundamental for understanding the effect of habitat changes on ecosystem functioning. Recent attempts to address this problem have sought to unify resource selection analysis, where animal space use is derived f...

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Published in:Methods in Ecology and Evolution
Main Authors: Potts, Jonathan R, Bastille-Rousseau, Guillaume, Murray, Dennis L, Schaefer, James A, Lewis, Mark A
Format: Text
Language:English
Published: BlackWell Publishing Ltd 2014
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375923
http://www.ncbi.nlm.nih.gov/pubmed/25834721
https://doi.org/10.1111/2041-210X.12150
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spelling ftpubmed:oai:pubmedcentral.nih.gov:4375923 2023-05-15T15:53:31+02:00 Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model Potts, Jonathan R Bastille-Rousseau, Guillaume Murray, Dennis L Schaefer, James A Lewis, Mark A 2014-03 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375923 http://www.ncbi.nlm.nih.gov/pubmed/25834721 https://doi.org/10.1111/2041-210X.12150 en eng BlackWell Publishing Ltd http://www.ncbi.nlm.nih.gov/pmc/articles/PMC http://www.ncbi.nlm.nih.gov/pubmed/25834721 http://dx.doi.org/10.1111/2041-210X.12150 © 2013 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. CC-BY-NC-ND Habitat Monitoring Text 2014 ftpubmed https://doi.org/10.1111/2041-210X.12150 2015-04-05T00:12:26Z Predicting space use patterns of animals from their interactions with the environment is fundamental for understanding the effect of habitat changes on ecosystem functioning. Recent attempts to address this problem have sought to unify resource selection analysis, where animal space use is derived from available habitat quality, and mechanistic movement models, where detailed movement processes of an animal are used to predict its emergent utilization distribution. Such models bias the animal's movement towards patches that are easily available and resource-rich, and the result is a predicted probability density at a given position being a function of the habitat quality at that position. However, in reality, the probability that an animal will use a patch of the terrain tends to be a function of the resource quality in both that patch and the surrounding habitat.We propose a mechanistic model where this non-local effect of resources naturally emerges from the local movement processes, by taking into account the relative utility of both the habitat where the animal currently resides and that of where it is moving. We give statistical techniques to parametrize the model from location data and demonstrate application of these techniques to GPS location data of caribou (Rangifer tarandus) in Newfoundland.Steady-state animal probability distributions arising from the model have complex patterns that cannot be expressed simply as a function of the local quality of the habitat. In particular, large areas of good habitat are used more intensively than smaller patches of equal quality habitat, whereas isolated patches are used less frequently. Both of these are real aspects of animal space use missing from previous mechanistic resource selection models.Whilst we focus on habitats in this study, our modelling framework can be readily used with any environmental covariates and therefore represents a unification of mechanistic modelling and step selection approaches to understanding animal space use. Text caribou Rangifer tarandus PubMed Central (PMC) Methods in Ecology and Evolution 5 3 253 262
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Habitat Monitoring
spellingShingle Habitat Monitoring
Potts, Jonathan R
Bastille-Rousseau, Guillaume
Murray, Dennis L
Schaefer, James A
Lewis, Mark A
Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
topic_facet Habitat Monitoring
description Predicting space use patterns of animals from their interactions with the environment is fundamental for understanding the effect of habitat changes on ecosystem functioning. Recent attempts to address this problem have sought to unify resource selection analysis, where animal space use is derived from available habitat quality, and mechanistic movement models, where detailed movement processes of an animal are used to predict its emergent utilization distribution. Such models bias the animal's movement towards patches that are easily available and resource-rich, and the result is a predicted probability density at a given position being a function of the habitat quality at that position. However, in reality, the probability that an animal will use a patch of the terrain tends to be a function of the resource quality in both that patch and the surrounding habitat.We propose a mechanistic model where this non-local effect of resources naturally emerges from the local movement processes, by taking into account the relative utility of both the habitat where the animal currently resides and that of where it is moving. We give statistical techniques to parametrize the model from location data and demonstrate application of these techniques to GPS location data of caribou (Rangifer tarandus) in Newfoundland.Steady-state animal probability distributions arising from the model have complex patterns that cannot be expressed simply as a function of the local quality of the habitat. In particular, large areas of good habitat are used more intensively than smaller patches of equal quality habitat, whereas isolated patches are used less frequently. Both of these are real aspects of animal space use missing from previous mechanistic resource selection models.Whilst we focus on habitats in this study, our modelling framework can be readily used with any environmental covariates and therefore represents a unification of mechanistic modelling and step selection approaches to understanding animal space use.
format Text
author Potts, Jonathan R
Bastille-Rousseau, Guillaume
Murray, Dennis L
Schaefer, James A
Lewis, Mark A
author_facet Potts, Jonathan R
Bastille-Rousseau, Guillaume
Murray, Dennis L
Schaefer, James A
Lewis, Mark A
author_sort Potts, Jonathan R
title Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
title_short Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
title_full Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
title_fullStr Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
title_full_unstemmed Predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
title_sort predicting local and non-local effects of resources on animal space use using a mechanistic step selection model
publisher BlackWell Publishing Ltd
publishDate 2014
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375923
http://www.ncbi.nlm.nih.gov/pubmed/25834721
https://doi.org/10.1111/2041-210X.12150
genre caribou
Rangifer tarandus
genre_facet caribou
Rangifer tarandus
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC
http://www.ncbi.nlm.nih.gov/pubmed/25834721
http://dx.doi.org/10.1111/2041-210X.12150
op_rights © 2013 The Authors. Methods in Ecology and Evolution published by John Wiley & Sons Ltd on behalf of British Ecological Society
http://creativecommons.org/licenses/by-nc-nd/3.0/
This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
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