Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor

Spatial variations in composition of marine microbial communities and its causes have largely been disclosed in studies comprising rather large environmental and spatial differences. In the present study, we explored if a moderate but temporally permanent climatic division within a contiguous arctic...

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Published in:Frontiers in Microbiology
Main Authors: Nguyen, Tan T., Landfald, Bjarne
Format: Text
Language:English
Published: Frontiers Media S.A. 2015
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304239
http://www.ncbi.nlm.nih.gov/pubmed/25667586
https://doi.org/10.3389/fmicb.2015.00017
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spelling ftpubmed:oai:pubmedcentral.nih.gov:4304239 2023-05-15T14:58:43+02:00 Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor Nguyen, Tan T. Landfald, Bjarne 2015-01-23 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304239 http://www.ncbi.nlm.nih.gov/pubmed/25667586 https://doi.org/10.3389/fmicb.2015.00017 en eng Frontiers Media S.A. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC http://www.ncbi.nlm.nih.gov/pubmed/25667586 http://dx.doi.org/10.3389/fmicb.2015.00017 Copyright © 2015 Nguyen and Landfald. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. CC-BY Microbiology Text 2015 ftpubmed https://doi.org/10.3389/fmicb.2015.00017 2015-02-15T00:53:47Z Spatial variations in composition of marine microbial communities and its causes have largely been disclosed in studies comprising rather large environmental and spatial differences. In the present study, we explored if a moderate but temporally permanent climatic division within a contiguous arctic shelf seafloor was traceable in the diversity patterns of its bacterial and archaeal communities. Soft bottom sediment samples were collected at 10 geographical locations, spanning spatial distances of up to 640 km, transecting the oceanic polar front in the Barents Sea. The northern sampling sites were generally colder, less saline, shallower, and showed higher concentrations of freshly sedimented phytopigments compared to the southern study locations. Sampling sites depicted low variation in relative abundances of taxa at class level, with persistent numerical dominance by lineages of Gamma- and Deltaproteobacteria (57–66% of bacterial sequence reads). The Archaea, which constituted 0.7–1.8% of 16S rRNA gene copy numbers in the sediment, were overwhelmingly (85.8%) affiliated with the Thaumarchaeota. Beta-diversity analyses showed the environmental variations throughout the sampling range to have a stronger impact on the structuring of both the bacterial and archaeal communities than spatial effects. While bacterial communities were significantly influenced by the combined effect of several weakly selective environmental differences, including temperature, archaeal communities appeared to be more uniquely structured by the level of freshly sedimented phytopigments. Text Arctic Barents Sea PubMed Central (PMC) Arctic Barents Sea Frontiers in Microbiology 6
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Microbiology
spellingShingle Microbiology
Nguyen, Tan T.
Landfald, Bjarne
Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
topic_facet Microbiology
description Spatial variations in composition of marine microbial communities and its causes have largely been disclosed in studies comprising rather large environmental and spatial differences. In the present study, we explored if a moderate but temporally permanent climatic division within a contiguous arctic shelf seafloor was traceable in the diversity patterns of its bacterial and archaeal communities. Soft bottom sediment samples were collected at 10 geographical locations, spanning spatial distances of up to 640 km, transecting the oceanic polar front in the Barents Sea. The northern sampling sites were generally colder, less saline, shallower, and showed higher concentrations of freshly sedimented phytopigments compared to the southern study locations. Sampling sites depicted low variation in relative abundances of taxa at class level, with persistent numerical dominance by lineages of Gamma- and Deltaproteobacteria (57–66% of bacterial sequence reads). The Archaea, which constituted 0.7–1.8% of 16S rRNA gene copy numbers in the sediment, were overwhelmingly (85.8%) affiliated with the Thaumarchaeota. Beta-diversity analyses showed the environmental variations throughout the sampling range to have a stronger impact on the structuring of both the bacterial and archaeal communities than spatial effects. While bacterial communities were significantly influenced by the combined effect of several weakly selective environmental differences, including temperature, archaeal communities appeared to be more uniquely structured by the level of freshly sedimented phytopigments.
format Text
author Nguyen, Tan T.
Landfald, Bjarne
author_facet Nguyen, Tan T.
Landfald, Bjarne
author_sort Nguyen, Tan T.
title Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
title_short Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
title_full Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
title_fullStr Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
title_full_unstemmed Polar front associated variation in prokaryotic community structure in Arctic shelf seafloor
title_sort polar front associated variation in prokaryotic community structure in arctic shelf seafloor
publisher Frontiers Media S.A.
publishDate 2015
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4304239
http://www.ncbi.nlm.nih.gov/pubmed/25667586
https://doi.org/10.3389/fmicb.2015.00017
geographic Arctic
Barents Sea
geographic_facet Arctic
Barents Sea
genre Arctic
Barents Sea
genre_facet Arctic
Barents Sea
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC
http://www.ncbi.nlm.nih.gov/pubmed/25667586
http://dx.doi.org/10.3389/fmicb.2015.00017
op_rights Copyright © 2015 Nguyen and Landfald.
http://creativecommons.org/licenses/by/4.0/
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2015.00017
container_title Frontiers in Microbiology
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