Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch

Knowledge of ancient viruses is limited due to their low concentration and poor preservation in ancient specimens. Using a viral particle-associated nucleic acid enrichment approach, we genetically characterized one complete DNA and one partial RNA viral genome from a 700-y-old fecal sample preserve...

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Published in:Proceedings of the National Academy of Sciences
Main Authors: Ng, Terry Fei Fan, Chen, Li-Fang, Zhou, Yanchen, Shapiro, Beth, Stiller, Mathias, Heintzman, Peter D., Varsani, Arvind, Kondov, Nikola O., Wong, Walt, Deng, Xutao, Andrews, Thomas D., Moorman, Brian J., Meulendyk, Thomas, MacKay, Glen, Gilbertson, Robert L., Delwart, Eric
Format: Text
Language:English
Published: National Academy of Sciences 2014
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4250163/
http://www.ncbi.nlm.nih.gov/pubmed/25349412
https://doi.org/10.1073/pnas.1410429111
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spelling ftpubmed:oai:pubmedcentral.nih.gov:4250163 2023-05-15T18:28:17+02:00 Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch Ng, Terry Fei Fan Chen, Li-Fang Zhou, Yanchen Shapiro, Beth Stiller, Mathias Heintzman, Peter D. Varsani, Arvind Kondov, Nikola O. Wong, Walt Deng, Xutao Andrews, Thomas D. Moorman, Brian J. Meulendyk, Thomas MacKay, Glen Gilbertson, Robert L. Delwart, Eric 2014-11-25 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4250163/ http://www.ncbi.nlm.nih.gov/pubmed/25349412 https://doi.org/10.1073/pnas.1410429111 en eng National Academy of Sciences http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4250163/ http://www.ncbi.nlm.nih.gov/pubmed/25349412 http://dx.doi.org/10.1073/pnas.1410429111 Biological Sciences Text 2014 ftpubmed https://doi.org/10.1073/pnas.1410429111 2015-05-30T23:58:31Z Knowledge of ancient viruses is limited due to their low concentration and poor preservation in ancient specimens. Using a viral particle-associated nucleic acid enrichment approach, we genetically characterized one complete DNA and one partial RNA viral genome from a 700-y-old fecal sample preserved in ice. Using reverse genetics, we reconstituted the DNA virus, which replicated and systemically spread in a model plant species. Under constant freezing conditions, encapsidated viral nucleic acids may therefore be preserved for centuries. Our finding indicates that cryogenically preserved materials can be repositories of ancient viral nucleic acids, which in turn allow molecular genetics to regenerate viruses to study their biology. Text Subarctic PubMed Central (PMC) Proceedings of the National Academy of Sciences 111 47 16842 16847
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Biological Sciences
spellingShingle Biological Sciences
Ng, Terry Fei Fan
Chen, Li-Fang
Zhou, Yanchen
Shapiro, Beth
Stiller, Mathias
Heintzman, Peter D.
Varsani, Arvind
Kondov, Nikola O.
Wong, Walt
Deng, Xutao
Andrews, Thomas D.
Moorman, Brian J.
Meulendyk, Thomas
MacKay, Glen
Gilbertson, Robert L.
Delwart, Eric
Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
topic_facet Biological Sciences
description Knowledge of ancient viruses is limited due to their low concentration and poor preservation in ancient specimens. Using a viral particle-associated nucleic acid enrichment approach, we genetically characterized one complete DNA and one partial RNA viral genome from a 700-y-old fecal sample preserved in ice. Using reverse genetics, we reconstituted the DNA virus, which replicated and systemically spread in a model plant species. Under constant freezing conditions, encapsidated viral nucleic acids may therefore be preserved for centuries. Our finding indicates that cryogenically preserved materials can be repositories of ancient viral nucleic acids, which in turn allow molecular genetics to regenerate viruses to study their biology.
format Text
author Ng, Terry Fei Fan
Chen, Li-Fang
Zhou, Yanchen
Shapiro, Beth
Stiller, Mathias
Heintzman, Peter D.
Varsani, Arvind
Kondov, Nikola O.
Wong, Walt
Deng, Xutao
Andrews, Thomas D.
Moorman, Brian J.
Meulendyk, Thomas
MacKay, Glen
Gilbertson, Robert L.
Delwart, Eric
author_facet Ng, Terry Fei Fan
Chen, Li-Fang
Zhou, Yanchen
Shapiro, Beth
Stiller, Mathias
Heintzman, Peter D.
Varsani, Arvind
Kondov, Nikola O.
Wong, Walt
Deng, Xutao
Andrews, Thomas D.
Moorman, Brian J.
Meulendyk, Thomas
MacKay, Glen
Gilbertson, Robert L.
Delwart, Eric
author_sort Ng, Terry Fei Fan
title Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
title_short Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
title_full Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
title_fullStr Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
title_full_unstemmed Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
title_sort preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch
publisher National Academy of Sciences
publishDate 2014
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4250163/
http://www.ncbi.nlm.nih.gov/pubmed/25349412
https://doi.org/10.1073/pnas.1410429111
genre Subarctic
genre_facet Subarctic
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4250163/
http://www.ncbi.nlm.nih.gov/pubmed/25349412
http://dx.doi.org/10.1073/pnas.1410429111
op_doi https://doi.org/10.1073/pnas.1410429111
container_title Proceedings of the National Academy of Sciences
container_volume 111
container_issue 47
container_start_page 16842
op_container_end_page 16847
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