High quality draft genome sequence of Streptomyces sp. strain AW19M42 isolated from a sea squirt in Northern Norway

Here we report the 8 Mb high quality draft genome of Streptomyces sp. strain AW19M42, together with specific properties of the organism and the generation, annotation and analysis of its genome sequence. The genome encodes 7,727 putative open reading frames, of which 6,400 could be assigned with COG...

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Bibliographic Details
Published in:Standards in Genomic Sciences
Main Authors: Bjerga, Gro Elin Kjæreng, Hjerde, Erik, De Santi, Concetta, Williamson, Adele Kim, Smalås, Arne Oskar, Willassen, Nils Peder, Altermark, Bjørn
Format: Text
Language:English
Published: Michigan State University 2014
Subjects:
Short Genome Reports
Norway
Northern Norway
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4148980
https://doi.org/10.4056/sigs.5038901
Description
Summary:Here we report the 8 Mb high quality draft genome of Streptomyces sp. strain AW19M42, together with specific properties of the organism and the generation, annotation and analysis of its genome sequence. The genome encodes 7,727 putative open reading frames, of which 6,400 could be assigned with COG categories. Also, 62 tRNA genes and 8 rRNA operons were identified. The genome harbors several gene clusters involved in the production of secondary metabolites. Functional screening of the isolate was positive for several enzymatic activities, and some candidate genes coding for those activities are listed in this report. We find that this isolate shows biotechnological potential and is an interesting target for bioprospecting.

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