Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice

The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP_RII contains roughly 120 tandem copies of an identical 104-residue repeat. W...

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Published in:Bioscience Reports
Main Authors: Vance, Tyler D. R., Olijve, Luuk L. C., Campbell, Robert L., Voets, Ilja K., Davies, Peter L., Guo, Shuaiqi
Format: Text
Language:English
Published: Portland Press Ltd. 2014
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Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4083281
http://www.ncbi.nlm.nih.gov/pubmed/24892750
https://doi.org/10.1042/BSR20140083
id ftpubmed:oai:pubmedcentral.nih.gov:4083281
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spelling ftpubmed:oai:pubmedcentral.nih.gov:4083281 2023-05-15T13:39:17+02:00 Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice Vance, Tyler D. R. Olijve, Luuk L. C. Campbell, Robert L. Voets, Ilja K. Davies, Peter L. Guo, Shuaiqi 2014-07-04 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4083281 http://www.ncbi.nlm.nih.gov/pubmed/24892750 https://doi.org/10.1042/BSR20140083 en eng Portland Press Ltd. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC http://www.ncbi.nlm.nih.gov/pubmed/24892750 http://dx.doi.org/10.1042/BSR20140083 © 2014 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Licence (CC-BY) (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Licence (CC-BY) (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution and reproduction in any medium, provided the original work is properly cited. CC-BY Original Paper Text 2014 ftpubmed https://doi.org/10.1042/BSR20140083 2014-07-20T00:46:00Z The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP_RII contains roughly 120 tandem copies of an identical 104-residue repeat. We have previously determined that a single RII repeat folds as a Ca2+-dependent immunoglobulin-like domain. Here, we solved the crystal structure of RII tetra-tandemer (four tandem RII repeats) to a resolution of 1.8 Å. The RII tetra-tandemer reveals an extended (~190-Å × ~25-Å), rod-like structure with four RII-repeats aligned in series with each other. The inter-repeat regions of the RII tetra-tandemer are strengthened by Ca2+ bound to acidic residues. SAXS (small-angle X-ray scattering) profiles indicate the RII tetra-tandemer is significantly rigidified upon Ca2+ binding, and that the protein's solution structure is in excellent agreement with its crystal structure. We hypothesize that >600 Ca2+ help rigidify the chain of ~120 104-residue repeats to form a ~0.6 μm rod-like structure in order to project the ice-binding domain of MpAFP away from the bacterial cell surface. The proposed extender role of RII can help the strictly aerobic, motile bacterium bind ice in the upper reaches of the Antarctic lake where oxygen and nutrients are most abundant. Ca2+-induced rigidity of tandem Ig-like repeats in large adhesins might be a general mechanism used by bacteria to bind to their substrates and help colonize specific niches. Text Antarc* Antarctic PubMed Central (PMC) Antarctic The Antarctic Bioscience Reports 34 4
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Original Paper
spellingShingle Original Paper
Vance, Tyler D. R.
Olijve, Luuk L. C.
Campbell, Robert L.
Voets, Ilja K.
Davies, Peter L.
Guo, Shuaiqi
Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
topic_facet Original Paper
description The large size of a 1.5-MDa ice-binding adhesin [MpAFP (Marinomonas primoryensis antifreeze protein)] from an Antarctic Gram-negative bacterium, M. primoryensis, is mainly due to its highly repetitive RII (Region II). MpAFP_RII contains roughly 120 tandem copies of an identical 104-residue repeat. We have previously determined that a single RII repeat folds as a Ca2+-dependent immunoglobulin-like domain. Here, we solved the crystal structure of RII tetra-tandemer (four tandem RII repeats) to a resolution of 1.8 Å. The RII tetra-tandemer reveals an extended (~190-Å × ~25-Å), rod-like structure with four RII-repeats aligned in series with each other. The inter-repeat regions of the RII tetra-tandemer are strengthened by Ca2+ bound to acidic residues. SAXS (small-angle X-ray scattering) profiles indicate the RII tetra-tandemer is significantly rigidified upon Ca2+ binding, and that the protein's solution structure is in excellent agreement with its crystal structure. We hypothesize that >600 Ca2+ help rigidify the chain of ~120 104-residue repeats to form a ~0.6 μm rod-like structure in order to project the ice-binding domain of MpAFP away from the bacterial cell surface. The proposed extender role of RII can help the strictly aerobic, motile bacterium bind ice in the upper reaches of the Antarctic lake where oxygen and nutrients are most abundant. Ca2+-induced rigidity of tandem Ig-like repeats in large adhesins might be a general mechanism used by bacteria to bind to their substrates and help colonize specific niches.
format Text
author Vance, Tyler D. R.
Olijve, Luuk L. C.
Campbell, Robert L.
Voets, Ilja K.
Davies, Peter L.
Guo, Shuaiqi
author_facet Vance, Tyler D. R.
Olijve, Luuk L. C.
Campbell, Robert L.
Voets, Ilja K.
Davies, Peter L.
Guo, Shuaiqi
author_sort Vance, Tyler D. R.
title Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_short Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_full Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_fullStr Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_full_unstemmed Ca2+-stabilized adhesin helps an Antarctic bacterium reach out and bind ice
title_sort ca2+-stabilized adhesin helps an antarctic bacterium reach out and bind ice
publisher Portland Press Ltd.
publishDate 2014
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4083281
http://www.ncbi.nlm.nih.gov/pubmed/24892750
https://doi.org/10.1042/BSR20140083
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC
http://www.ncbi.nlm.nih.gov/pubmed/24892750
http://dx.doi.org/10.1042/BSR20140083
op_rights © 2014 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Licence (CC-BY) (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution and reproduction in any medium, provided the original work is properly cited.
http://creativecommons.org/licenses/by/3.0/
This is an Open Access article distributed under the terms of the Creative Commons Attribution Licence (CC-BY) (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution and reproduction in any medium, provided the original work is properly cited.
op_rightsnorm CC-BY
op_doi https://doi.org/10.1042/BSR20140083
container_title Bioscience Reports
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container_issue 4
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