Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment
Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “Candidatus Nitrosopumilus koreensis” AR1, which was found to domina...
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ftpubmed:oai:pubmedcentral.nih.gov:3510587 2023-05-15T14:58:56+02:00 Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun 2012-12 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510587 http://www.ncbi.nlm.nih.gov/pubmed/23209206 https://doi.org/10.1128/JB.01857-12 en eng American Society for Microbiology http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510587 http://www.ncbi.nlm.nih.gov/pubmed/23209206 http://dx.doi.org/10.1128/JB.01857-12 Copyright © 2012, American Society for Microbiology. All Rights Reserved. Genome Announcements Text 2012 ftpubmed https://doi.org/10.1128/JB.01857-12 2013-09-04T16:35:54Z Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “Candidatus Nitrosopumilus koreensis” AR1, which was found to dominate an ammonia-oxidizing enrichment culture in marine sediment off Svalbard, the Arctic Circle. Despite a significant number of nonoverlapping genes (ca. 30%), similarities of this strain to “Candidatus Nitrosopumilus maritimus” were revealed by core genes for archaeal ammonia oxidation and carbon fixation, G+C content, and extensive synteny conservation. Text Arctic Svalbard PubMed Central (PMC) Arctic Svalbard Journal of Bacteriology 194 24 6940 6941 |
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topic |
Genome Announcements |
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Genome Announcements Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
topic_facet |
Genome Announcements |
description |
Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “Candidatus Nitrosopumilus koreensis” AR1, which was found to dominate an ammonia-oxidizing enrichment culture in marine sediment off Svalbard, the Arctic Circle. Despite a significant number of nonoverlapping genes (ca. 30%), similarities of this strain to “Candidatus Nitrosopumilus maritimus” were revealed by core genes for archaeal ammonia oxidation and carbon fixation, G+C content, and extensive synteny conservation. |
format |
Text |
author |
Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun |
author_facet |
Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun |
author_sort |
Park, Soo-Je |
title |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_short |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_full |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_fullStr |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_full_unstemmed |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_sort |
draft genome sequence of an ammonia-oxidizing archaeon, “candidatus nitrosopumilus koreensis” ar1, from marine sediment |
publisher |
American Society for Microbiology |
publishDate |
2012 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510587 http://www.ncbi.nlm.nih.gov/pubmed/23209206 https://doi.org/10.1128/JB.01857-12 |
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Arctic Svalbard |
geographic_facet |
Arctic Svalbard |
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Arctic Svalbard |
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Arctic Svalbard |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510587 http://www.ncbi.nlm.nih.gov/pubmed/23209206 http://dx.doi.org/10.1128/JB.01857-12 |
op_rights |
Copyright © 2012, American Society for Microbiology. All Rights Reserved. |
op_doi |
https://doi.org/10.1128/JB.01857-12 |
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Journal of Bacteriology |
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194 |
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24 |
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6940 |
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6941 |
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1766331041822277632 |