Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus

Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light' and ‘low-light' adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distribut...

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Published in:The ISME Journal
Main Authors: Demir-Hilton, Elif, Sudek, Sebastian, Cuvelier, Marie L, Gentemann, Chelle L, Zehr, Jonathan P, Worden, Alexandra Z
Format: Text
Language:English
Published: Nature Publishing Group 2011
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146286
http://www.ncbi.nlm.nih.gov/pubmed/21289652
https://doi.org/10.1038/ismej.2010.209
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spelling ftpubmed:oai:pubmedcentral.nih.gov:3146286 2023-05-15T17:35:08+02:00 Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus Demir-Hilton, Elif Sudek, Sebastian Cuvelier, Marie L Gentemann, Chelle L Zehr, Jonathan P Worden, Alexandra Z 2011-07 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146286 http://www.ncbi.nlm.nih.gov/pubmed/21289652 https://doi.org/10.1038/ismej.2010.209 en eng Nature Publishing Group http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146286 http://www.ncbi.nlm.nih.gov/pubmed/21289652 http://dx.doi.org/10.1038/ismej.2010.209 Copyright © 2011 International Society for Microbial Ecology Original Article Text 2011 ftpubmed https://doi.org/10.1038/ismej.2010.209 2013-09-03T18:00:45Z Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light' and ‘low-light' adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributions and relationships to this form of niche partitioning are unknown in nature. We developed two quantitative PCR primer-probe sets and enumerated the proposed ecotypes in the Pacific Ocean as well as the subtropical and tropical North Atlantic. Statistical differences in factors such as salinity, temperature and NO3 indicated the ecophysiological parameters behind clade distributions are more complex than irradiance alone. Clade OII, containing the putatively low-light adapted strains, was detected at warm oligotrophic sites. In contrast, Clade OI, containing high-light adapted strains, was present in cooler mesotrophic and coastal waters. Maximal OI abundance (19 555±37 18S rDNA copies per ml) was detected in mesotrophic waters at 40 m depth, approaching the nutricline. OII was often more abundant at the deep chlorophyll maximum, when nutrient concentrations were significantly higher than at the surface (stratified euphotic zone waters). However, in mixed euphotic-zone water columns, relatively high numbers (for example, 891±107 18S rDNA copies per ml, Sargasso Sea, springtime) were detected at the surface. Both Clades OI and OII were found at multiple euphotic zone depths, but co-occurrence at the same geographical location appeared rare and was detected only in continental slope waters. In situ growth rate estimates using these primer-probes and better comprehension of physiology will enhance ecological understanding of Ostreococcus Clades OII and OI which appear to be oceanic and coastal clades, respectively. Text North Atlantic PubMed Central (PMC) Pacific The ISME Journal 5 7 1095 1107
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Original Article
spellingShingle Original Article
Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
topic_facet Original Article
description Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light' and ‘low-light' adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributions and relationships to this form of niche partitioning are unknown in nature. We developed two quantitative PCR primer-probe sets and enumerated the proposed ecotypes in the Pacific Ocean as well as the subtropical and tropical North Atlantic. Statistical differences in factors such as salinity, temperature and NO3 indicated the ecophysiological parameters behind clade distributions are more complex than irradiance alone. Clade OII, containing the putatively low-light adapted strains, was detected at warm oligotrophic sites. In contrast, Clade OI, containing high-light adapted strains, was present in cooler mesotrophic and coastal waters. Maximal OI abundance (19 555±37 18S rDNA copies per ml) was detected in mesotrophic waters at 40 m depth, approaching the nutricline. OII was often more abundant at the deep chlorophyll maximum, when nutrient concentrations were significantly higher than at the surface (stratified euphotic zone waters). However, in mixed euphotic-zone water columns, relatively high numbers (for example, 891±107 18S rDNA copies per ml, Sargasso Sea, springtime) were detected at the surface. Both Clades OI and OII were found at multiple euphotic zone depths, but co-occurrence at the same geographical location appeared rare and was detected only in continental slope waters. In situ growth rate estimates using these primer-probes and better comprehension of physiology will enhance ecological understanding of Ostreococcus Clades OII and OI which appear to be oceanic and coastal clades, respectively.
format Text
author Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
author_facet Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
author_sort Demir-Hilton, Elif
title Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_short Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_full Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_fullStr Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_full_unstemmed Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_sort global distribution patterns of distinct clades of the photosynthetic picoeukaryote ostreococcus
publisher Nature Publishing Group
publishDate 2011
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146286
http://www.ncbi.nlm.nih.gov/pubmed/21289652
https://doi.org/10.1038/ismej.2010.209
geographic Pacific
geographic_facet Pacific
genre North Atlantic
genre_facet North Atlantic
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146286
http://www.ncbi.nlm.nih.gov/pubmed/21289652
http://dx.doi.org/10.1038/ismej.2010.209
op_rights Copyright © 2011 International Society for Microbial Ecology
op_doi https://doi.org/10.1038/ismej.2010.209
container_title The ISME Journal
container_volume 5
container_issue 7
container_start_page 1095
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