Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element

Variations in regulatory regions of developmental control genes have been implicated in the divergence of axial morphologies. To find potentially significant changes in cis-regulatory regions, we compared nucleotide sequences and activities of mammalian Hoxc8 early enhancers. The nucleotide sequence...

Full description

Bibliographic Details
Main Authors: Shashikant, Cooduvalli S., Kim, Chang B., Borbély, Marc A., Wang, Wayne C. H., Ruddle, Frank H.
Format: Text
Language:English
Published: The National Academy of Sciences 1998
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC28062
http://www.ncbi.nlm.nih.gov/pubmed/9860988
id ftpubmed:oai:pubmedcentral.nih.gov:28062
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:28062 2023-05-15T15:36:52+02:00 Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element Shashikant, Cooduvalli S. Kim, Chang B. Borbély, Marc A. Wang, Wayne C. H. Ruddle, Frank H. 1998-12-22 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC28062 http://www.ncbi.nlm.nih.gov/pubmed/9860988 en eng The National Academy of Sciences http://www.ncbi.nlm.nih.gov/pmc/articles/PMC28062 http://www.ncbi.nlm.nih.gov/pubmed/9860988 Copyright © 1998, The National Academy of Sciences Biological Sciences Text 1998 ftpubmed 2013-08-29T07:23:38Z Variations in regulatory regions of developmental control genes have been implicated in the divergence of axial morphologies. To find potentially significant changes in cis-regulatory regions, we compared nucleotide sequences and activities of mammalian Hoxc8 early enhancers. The nucleotide sequence of the early enhancer region is extremely conserved among mammalian clades, with five previously described cis-acting elements, A–E, being invariant. However, a 4-bp deletion within element C of the Hoxc8 early enhancer sequence is observed in baleen whales. When assayed in transgenic mouse embryos, a baleen whale enhancer (unlike other mammalian enhancers) directs expression of the reporter gene to more posterior regions of the neural tube but fails to direct expression to posterior mesoderm. We suggest that regulation of Hoxc8 in baleen whales differs from other mammalian species and may be associated with variation in axial morphology. Text baleen whale baleen whales PubMed Central (PMC)
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Biological Sciences
spellingShingle Biological Sciences
Shashikant, Cooduvalli S.
Kim, Chang B.
Borbély, Marc A.
Wang, Wayne C. H.
Ruddle, Frank H.
Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
topic_facet Biological Sciences
description Variations in regulatory regions of developmental control genes have been implicated in the divergence of axial morphologies. To find potentially significant changes in cis-regulatory regions, we compared nucleotide sequences and activities of mammalian Hoxc8 early enhancers. The nucleotide sequence of the early enhancer region is extremely conserved among mammalian clades, with five previously described cis-acting elements, A–E, being invariant. However, a 4-bp deletion within element C of the Hoxc8 early enhancer sequence is observed in baleen whales. When assayed in transgenic mouse embryos, a baleen whale enhancer (unlike other mammalian enhancers) directs expression of the reporter gene to more posterior regions of the neural tube but fails to direct expression to posterior mesoderm. We suggest that regulation of Hoxc8 in baleen whales differs from other mammalian species and may be associated with variation in axial morphology.
format Text
author Shashikant, Cooduvalli S.
Kim, Chang B.
Borbély, Marc A.
Wang, Wayne C. H.
Ruddle, Frank H.
author_facet Shashikant, Cooduvalli S.
Kim, Chang B.
Borbély, Marc A.
Wang, Wayne C. H.
Ruddle, Frank H.
author_sort Shashikant, Cooduvalli S.
title Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
title_short Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
title_full Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
title_fullStr Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
title_full_unstemmed Comparative studies on mammalian Hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
title_sort comparative studies on mammalian hoxc8 early enhancer sequence reveal a baleen whale-specific deletion of a cis-acting element
publisher The National Academy of Sciences
publishDate 1998
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC28062
http://www.ncbi.nlm.nih.gov/pubmed/9860988
genre baleen whale
baleen whales
genre_facet baleen whale
baleen whales
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC28062
http://www.ncbi.nlm.nih.gov/pubmed/9860988
op_rights Copyright © 1998, The National Academy of Sciences
_version_ 1766367308669779968