Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene f...
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ftpubmed:oai:pubmedcentral.nih.gov:1265979 2023-05-15T13:58:05+02:00 Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica Karr, Elizabeth A. Sattley, W. Matthew Rice, Melissa R. Jung, Deborah O. Madigan, Michael T. Achenbach, Laurie A. 2005-10 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 https://doi.org/10.1128/AEM.71.10.6353-6359.2005 en eng American Society for Microbiology http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 http://dx.doi.org/10.1128/AEM.71.10.6353-6359.2005 Copyright © 2005, American Society for Microbiology Microbial Ecology Text 2005 ftpubmed https://doi.org/10.1128/AEM.71.10.6353-6359.2005 2013-08-30T16:18:11Z The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene for the dissimilatory sulfite reductase alpha subunit were employed to analyze environmental DNA obtained from the water column and sediments of Lake Fryxell. In addition, enrichment cultures of sulfate-reducing bacteria established at 4°C from Lake Fryxell water were also screened using the dsrA primer set. The sequence information obtained showed that a diverse group of sulfate-reducing prokaryotes of the domain Bacteria inhabit Lake Fryxell. With one exception, the enrichment culture sequences were not represented within the environmental sequences. Sequence data were compared with the geochemical profile of Lake Fryxell to identify possible connections between the diversity of sulfate-reducing bacteria and limnological conditions. Several clone groups were highly localized with respect to lake depth and, therefore, experienced specific physiochemical conditions. However, all sulfate-reducing bacteria inhabiting Lake Fryxell must function under the constantly cold conditions characteristic of this extreme environment. Text Antarc* Antarctica McMurdo Dry Valleys PubMed Central (PMC) Frozen Lake ENVELOPE(76.108,76.108,-69.415,-69.415) Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) Lake Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) McMurdo Dry Valleys Applied and Environmental Microbiology 71 10 6353 6359 |
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PubMed Central (PMC) |
op_collection_id |
ftpubmed |
language |
English |
topic |
Microbial Ecology |
spellingShingle |
Microbial Ecology Karr, Elizabeth A. Sattley, W. Matthew Rice, Melissa R. Jung, Deborah O. Madigan, Michael T. Achenbach, Laurie A. Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
topic_facet |
Microbial Ecology |
description |
The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene for the dissimilatory sulfite reductase alpha subunit were employed to analyze environmental DNA obtained from the water column and sediments of Lake Fryxell. In addition, enrichment cultures of sulfate-reducing bacteria established at 4°C from Lake Fryxell water were also screened using the dsrA primer set. The sequence information obtained showed that a diverse group of sulfate-reducing prokaryotes of the domain Bacteria inhabit Lake Fryxell. With one exception, the enrichment culture sequences were not represented within the environmental sequences. Sequence data were compared with the geochemical profile of Lake Fryxell to identify possible connections between the diversity of sulfate-reducing bacteria and limnological conditions. Several clone groups were highly localized with respect to lake depth and, therefore, experienced specific physiochemical conditions. However, all sulfate-reducing bacteria inhabiting Lake Fryxell must function under the constantly cold conditions characteristic of this extreme environment. |
format |
Text |
author |
Karr, Elizabeth A. Sattley, W. Matthew Rice, Melissa R. Jung, Deborah O. Madigan, Michael T. Achenbach, Laurie A. |
author_facet |
Karr, Elizabeth A. Sattley, W. Matthew Rice, Melissa R. Jung, Deborah O. Madigan, Michael T. Achenbach, Laurie A. |
author_sort |
Karr, Elizabeth A. |
title |
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
title_short |
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
title_full |
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
title_fullStr |
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
title_full_unstemmed |
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica |
title_sort |
diversity and distribution of sulfate-reducing bacteria in permanently frozen lake fryxell, mcmurdo dry valleys, antarctica |
publisher |
American Society for Microbiology |
publishDate |
2005 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 https://doi.org/10.1128/AEM.71.10.6353-6359.2005 |
long_lat |
ENVELOPE(76.108,76.108,-69.415,-69.415) ENVELOPE(163.183,163.183,-77.617,-77.617) ENVELOPE(163.183,163.183,-77.617,-77.617) |
geographic |
Frozen Lake Fryxell Lake Fryxell McMurdo Dry Valleys |
geographic_facet |
Frozen Lake Fryxell Lake Fryxell McMurdo Dry Valleys |
genre |
Antarc* Antarctica McMurdo Dry Valleys |
genre_facet |
Antarc* Antarctica McMurdo Dry Valleys |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 http://dx.doi.org/10.1128/AEM.71.10.6353-6359.2005 |
op_rights |
Copyright © 2005, American Society for Microbiology |
op_doi |
https://doi.org/10.1128/AEM.71.10.6353-6359.2005 |
container_title |
Applied and Environmental Microbiology |
container_volume |
71 |
container_issue |
10 |
container_start_page |
6353 |
op_container_end_page |
6359 |
_version_ |
1766266104766791680 |