Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica

The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene f...

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Published in:Applied and Environmental Microbiology
Main Authors: Karr, Elizabeth A., Sattley, W. Matthew, Rice, Melissa R., Jung, Deborah O., Madigan, Michael T., Achenbach, Laurie A.
Format: Text
Language:English
Published: American Society for Microbiology 2005
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979
http://www.ncbi.nlm.nih.gov/pubmed/16204557
https://doi.org/10.1128/AEM.71.10.6353-6359.2005
id ftpubmed:oai:pubmedcentral.nih.gov:1265979
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spelling ftpubmed:oai:pubmedcentral.nih.gov:1265979 2023-05-15T13:58:05+02:00 Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica Karr, Elizabeth A. Sattley, W. Matthew Rice, Melissa R. Jung, Deborah O. Madigan, Michael T. Achenbach, Laurie A. 2005-10 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 https://doi.org/10.1128/AEM.71.10.6353-6359.2005 en eng American Society for Microbiology http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979 http://www.ncbi.nlm.nih.gov/pubmed/16204557 http://dx.doi.org/10.1128/AEM.71.10.6353-6359.2005 Copyright © 2005, American Society for Microbiology Microbial Ecology Text 2005 ftpubmed https://doi.org/10.1128/AEM.71.10.6353-6359.2005 2013-08-30T16:18:11Z The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene for the dissimilatory sulfite reductase alpha subunit were employed to analyze environmental DNA obtained from the water column and sediments of Lake Fryxell. In addition, enrichment cultures of sulfate-reducing bacteria established at 4°C from Lake Fryxell water were also screened using the dsrA primer set. The sequence information obtained showed that a diverse group of sulfate-reducing prokaryotes of the domain Bacteria inhabit Lake Fryxell. With one exception, the enrichment culture sequences were not represented within the environmental sequences. Sequence data were compared with the geochemical profile of Lake Fryxell to identify possible connections between the diversity of sulfate-reducing bacteria and limnological conditions. Several clone groups were highly localized with respect to lake depth and, therefore, experienced specific physiochemical conditions. However, all sulfate-reducing bacteria inhabiting Lake Fryxell must function under the constantly cold conditions characteristic of this extreme environment. Text Antarc* Antarctica McMurdo Dry Valleys PubMed Central (PMC) Frozen Lake ENVELOPE(76.108,76.108,-69.415,-69.415) Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) Lake Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) McMurdo Dry Valleys Applied and Environmental Microbiology 71 10 6353 6359
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Microbial Ecology
spellingShingle Microbial Ecology
Karr, Elizabeth A.
Sattley, W. Matthew
Rice, Melissa R.
Jung, Deborah O.
Madigan, Michael T.
Achenbach, Laurie A.
Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
topic_facet Microbial Ecology
description The permanently frozen freshwater Lake Fryxell, located in the Dry Valleys of Antarctica, exhibits an ideal geochemistry for microbial sulfate reduction. To investigate the population of sulfate-reducing bacteria in Lake Fryxell, both 16S rRNA gene and metabolic primer sets targeting the dsrA gene for the dissimilatory sulfite reductase alpha subunit were employed to analyze environmental DNA obtained from the water column and sediments of Lake Fryxell. In addition, enrichment cultures of sulfate-reducing bacteria established at 4°C from Lake Fryxell water were also screened using the dsrA primer set. The sequence information obtained showed that a diverse group of sulfate-reducing prokaryotes of the domain Bacteria inhabit Lake Fryxell. With one exception, the enrichment culture sequences were not represented within the environmental sequences. Sequence data were compared with the geochemical profile of Lake Fryxell to identify possible connections between the diversity of sulfate-reducing bacteria and limnological conditions. Several clone groups were highly localized with respect to lake depth and, therefore, experienced specific physiochemical conditions. However, all sulfate-reducing bacteria inhabiting Lake Fryxell must function under the constantly cold conditions characteristic of this extreme environment.
format Text
author Karr, Elizabeth A.
Sattley, W. Matthew
Rice, Melissa R.
Jung, Deborah O.
Madigan, Michael T.
Achenbach, Laurie A.
author_facet Karr, Elizabeth A.
Sattley, W. Matthew
Rice, Melissa R.
Jung, Deborah O.
Madigan, Michael T.
Achenbach, Laurie A.
author_sort Karr, Elizabeth A.
title Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
title_short Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
title_full Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
title_fullStr Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
title_full_unstemmed Diversity and Distribution of Sulfate-Reducing Bacteria in Permanently Frozen Lake Fryxell, McMurdo Dry Valleys, Antarctica
title_sort diversity and distribution of sulfate-reducing bacteria in permanently frozen lake fryxell, mcmurdo dry valleys, antarctica
publisher American Society for Microbiology
publishDate 2005
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979
http://www.ncbi.nlm.nih.gov/pubmed/16204557
https://doi.org/10.1128/AEM.71.10.6353-6359.2005
long_lat ENVELOPE(76.108,76.108,-69.415,-69.415)
ENVELOPE(163.183,163.183,-77.617,-77.617)
ENVELOPE(163.183,163.183,-77.617,-77.617)
geographic Frozen Lake
Fryxell
Lake Fryxell
McMurdo Dry Valleys
geographic_facet Frozen Lake
Fryxell
Lake Fryxell
McMurdo Dry Valleys
genre Antarc*
Antarctica
McMurdo Dry Valleys
genre_facet Antarc*
Antarctica
McMurdo Dry Valleys
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265979
http://www.ncbi.nlm.nih.gov/pubmed/16204557
http://dx.doi.org/10.1128/AEM.71.10.6353-6359.2005
op_rights Copyright © 2005, American Society for Microbiology
op_doi https://doi.org/10.1128/AEM.71.10.6353-6359.2005
container_title Applied and Environmental Microbiology
container_volume 71
container_issue 10
container_start_page 6353
op_container_end_page 6359
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