Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks

Endolithic microorganisms, ranging from microeukaryotes to bacteria and archaea, live within the cracks and crevices of rocks. Deception Island in Antarctica constitutes an extreme environment in which endoliths face environmental threats such as intense cold, lack of light in winter, high solar rad...

Full description

Bibliographic Details
Published in:International Journal of Molecular Sciences
Main Authors: Hidalgo-Arias, Andrea, Muñoz-Hisado, Víctor, Valles, Pilar, Geyer, Adelina, Garcia-Lopez, Eva, Cid, Cristina
Format: Text
Language:English
Published: MDPI 2023
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530270/
https://doi.org/10.3390/ijms241813824
id ftpubmed:oai:pubmedcentral.nih.gov:10530270
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:10530270 2023-10-29T02:32:28+01:00 Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks Hidalgo-Arias, Andrea Muñoz-Hisado, Víctor Valles, Pilar Geyer, Adelina Garcia-Lopez, Eva Cid, Cristina 2023-09-07 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530270/ https://doi.org/10.3390/ijms241813824 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530270/ http://dx.doi.org/10.3390/ijms241813824 © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Int J Mol Sci Article Text 2023 ftpubmed https://doi.org/10.3390/ijms241813824 2023-10-01T01:09:07Z Endolithic microorganisms, ranging from microeukaryotes to bacteria and archaea, live within the cracks and crevices of rocks. Deception Island in Antarctica constitutes an extreme environment in which endoliths face environmental threats such as intense cold, lack of light in winter, high solar radiation in summer, and heat emitted as the result of volcanic eruptions. In addition, the endolithic biome is considered the harshest one on Earth, since it suffers added threats such as dryness or lack of nutrients. Even so, samples from this hostile environment, collected at various points throughout the island, hosted diverse and numerous microorganisms such as bacteria, fungi, diatoms, ciliates, flagellates and unicellular algae. These endoliths were first identified by Scanning Electron Microscopy (SEM). To understand the molecular mechanisms of adaptation of these endoliths to their environment, genomics techniques were used, and prokaryotic and eukaryotic microorganisms were identified by metabarcoding, sequencing the V3–V4 and V4–V5 regions of the 16S and 18S rRNA genes, respectively. Subsequently, the sequences were analyzed by bioinformatic methods that allow their metabolism to be deduced from the taxonomy. The results obtained concluded that some of these microorganisms have activated the biosynthesis routes of pigments such as prodigiosin or flavonoids. These adaptation studies also revealed that microorganisms defend themselves against environmental toxins by activating metabolic pathways for the degradation of compounds such as ethylbenzene, xylene and dioxins and for the biosynthesis of antioxidant molecules such as glutathione. Finally, these Antarctic endolithic microorganisms are of great interest in astrobiology since endolithic settings are environmentally analogous to the primitive Earth or the surfaces of extraterrestrial bodies. Text Antarc* Antarctic Antarctica Deception Island PubMed Central (PMC) International Journal of Molecular Sciences 24 18 13824
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Hidalgo-Arias, Andrea
Muñoz-Hisado, Víctor
Valles, Pilar
Geyer, Adelina
Garcia-Lopez, Eva
Cid, Cristina
Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
topic_facet Article
description Endolithic microorganisms, ranging from microeukaryotes to bacteria and archaea, live within the cracks and crevices of rocks. Deception Island in Antarctica constitutes an extreme environment in which endoliths face environmental threats such as intense cold, lack of light in winter, high solar radiation in summer, and heat emitted as the result of volcanic eruptions. In addition, the endolithic biome is considered the harshest one on Earth, since it suffers added threats such as dryness or lack of nutrients. Even so, samples from this hostile environment, collected at various points throughout the island, hosted diverse and numerous microorganisms such as bacteria, fungi, diatoms, ciliates, flagellates and unicellular algae. These endoliths were first identified by Scanning Electron Microscopy (SEM). To understand the molecular mechanisms of adaptation of these endoliths to their environment, genomics techniques were used, and prokaryotic and eukaryotic microorganisms were identified by metabarcoding, sequencing the V3–V4 and V4–V5 regions of the 16S and 18S rRNA genes, respectively. Subsequently, the sequences were analyzed by bioinformatic methods that allow their metabolism to be deduced from the taxonomy. The results obtained concluded that some of these microorganisms have activated the biosynthesis routes of pigments such as prodigiosin or flavonoids. These adaptation studies also revealed that microorganisms defend themselves against environmental toxins by activating metabolic pathways for the degradation of compounds such as ethylbenzene, xylene and dioxins and for the biosynthesis of antioxidant molecules such as glutathione. Finally, these Antarctic endolithic microorganisms are of great interest in astrobiology since endolithic settings are environmentally analogous to the primitive Earth or the surfaces of extraterrestrial bodies.
format Text
author Hidalgo-Arias, Andrea
Muñoz-Hisado, Víctor
Valles, Pilar
Geyer, Adelina
Garcia-Lopez, Eva
Cid, Cristina
author_facet Hidalgo-Arias, Andrea
Muñoz-Hisado, Víctor
Valles, Pilar
Geyer, Adelina
Garcia-Lopez, Eva
Cid, Cristina
author_sort Hidalgo-Arias, Andrea
title Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
title_short Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
title_full Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
title_fullStr Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
title_full_unstemmed Adaptation of the Endolithic Biome in Antarctic Volcanic Rocks
title_sort adaptation of the endolithic biome in antarctic volcanic rocks
publisher MDPI
publishDate 2023
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530270/
https://doi.org/10.3390/ijms241813824
genre Antarc*
Antarctic
Antarctica
Deception Island
genre_facet Antarc*
Antarctic
Antarctica
Deception Island
op_source Int J Mol Sci
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530270/
http://dx.doi.org/10.3390/ijms241813824
op_rights © 2023 by the authors.
https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
op_doi https://doi.org/10.3390/ijms241813824
container_title International Journal of Molecular Sciences
container_volume 24
container_issue 18
container_start_page 13824
_version_ 1781053908188135424