Species Identification of Caviar Based on Multiple DNA Barcoding

This study aimed to explore the applicability of DNA barcoding for assessing the authenticity of caviar on the Chinese market. A set of universal COI primers and two sets of designed primers based on COI and D-loop genes were used to identify maternal species of samples from 21 batches of caviar. Th...

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Published in:Molecules
Main Authors: Hu, Qingqing, Pan, Yingqiu, Xia, Huili, Yu, Kexin, Yao, Yian, Guan, Feng
Format: Text
Language:English
Published: MDPI 2023
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343275/
https://doi.org/10.3390/molecules28135046
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spelling ftpubmed:oai:pubmedcentral.nih.gov:10343275 2023-07-30T03:55:24+02:00 Species Identification of Caviar Based on Multiple DNA Barcoding Hu, Qingqing Pan, Yingqiu Xia, Huili Yu, Kexin Yao, Yian Guan, Feng 2023-06-28 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343275/ https://doi.org/10.3390/molecules28135046 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343275/ http://dx.doi.org/10.3390/molecules28135046 © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Molecules Article Text 2023 ftpubmed https://doi.org/10.3390/molecules28135046 2023-07-16T01:20:15Z This study aimed to explore the applicability of DNA barcoding for assessing the authenticity of caviar on the Chinese market. A set of universal COI primers and two sets of designed primers based on COI and D-loop genes were used to identify maternal species of samples from 21 batches of caviar. The results showed that the PCR products from three sets of primers had more than 98% similarity to the sequences in database. The COI gene could not distinguish sturgeons with closed genetic relationships, while D-loop gene could effectively improve the accuracy of DNA barcoding and was more suitable to the identification of interspecific sturgeon than the COI gene. The neighbor-joining dendrogram further confirmed the applicability and accuracy of COI and D-loop genes in identifying maternal relatives of caviar (Acipenser baerii/Acipenser gueldenstaedtii/Acipenser schrenckii/Huso dauricus/Huso huso). Despite the limitations of mitochondrial DNA in identifying hybrid sturgeon species, the presence of counterfeit caviar of non-sturgeon ingredients could be excluded. All the caviar samples were identified successfully as sturgeon species, but the mislabeling rate of species was 33.4%, indicating that there were illegal phenomena such as disorderly labeling, mislabeling, and adulteration on the market. Text Acipenser baerii PubMed Central (PMC) Molecules 28 13 5046
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Hu, Qingqing
Pan, Yingqiu
Xia, Huili
Yu, Kexin
Yao, Yian
Guan, Feng
Species Identification of Caviar Based on Multiple DNA Barcoding
topic_facet Article
description This study aimed to explore the applicability of DNA barcoding for assessing the authenticity of caviar on the Chinese market. A set of universal COI primers and two sets of designed primers based on COI and D-loop genes were used to identify maternal species of samples from 21 batches of caviar. The results showed that the PCR products from three sets of primers had more than 98% similarity to the sequences in database. The COI gene could not distinguish sturgeons with closed genetic relationships, while D-loop gene could effectively improve the accuracy of DNA barcoding and was more suitable to the identification of interspecific sturgeon than the COI gene. The neighbor-joining dendrogram further confirmed the applicability and accuracy of COI and D-loop genes in identifying maternal relatives of caviar (Acipenser baerii/Acipenser gueldenstaedtii/Acipenser schrenckii/Huso dauricus/Huso huso). Despite the limitations of mitochondrial DNA in identifying hybrid sturgeon species, the presence of counterfeit caviar of non-sturgeon ingredients could be excluded. All the caviar samples were identified successfully as sturgeon species, but the mislabeling rate of species was 33.4%, indicating that there were illegal phenomena such as disorderly labeling, mislabeling, and adulteration on the market.
format Text
author Hu, Qingqing
Pan, Yingqiu
Xia, Huili
Yu, Kexin
Yao, Yian
Guan, Feng
author_facet Hu, Qingqing
Pan, Yingqiu
Xia, Huili
Yu, Kexin
Yao, Yian
Guan, Feng
author_sort Hu, Qingqing
title Species Identification of Caviar Based on Multiple DNA Barcoding
title_short Species Identification of Caviar Based on Multiple DNA Barcoding
title_full Species Identification of Caviar Based on Multiple DNA Barcoding
title_fullStr Species Identification of Caviar Based on Multiple DNA Barcoding
title_full_unstemmed Species Identification of Caviar Based on Multiple DNA Barcoding
title_sort species identification of caviar based on multiple dna barcoding
publisher MDPI
publishDate 2023
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343275/
https://doi.org/10.3390/molecules28135046
genre Acipenser baerii
genre_facet Acipenser baerii
op_source Molecules
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343275/
http://dx.doi.org/10.3390/molecules28135046
op_rights © 2023 by the authors.
https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
op_doi https://doi.org/10.3390/molecules28135046
container_title Molecules
container_volume 28
container_issue 13
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