Analyzing Strategies for Containing Avian Influenza

In this paper, we couple a general-purpose infectious disease theory with a computational modeling framework to analyze strategies for avian influenza containment. We focus on virus transmission among domestic poultry populations to optimize and evaluate the effectiveness of three containment strate...

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Main Authors: Lee, Eva K., Liu, YiFan, El-Tahawy, Abdelgawad, Fasina, Folorunso O.
Format: Text
Language:English
Published: American Medical Informatics Association 2023
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148328/
http://www.ncbi.nlm.nih.gov/pubmed/37128393
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spelling ftpubmed:oai:pubmedcentral.nih.gov:10148328 2023-06-11T04:10:24+02:00 Analyzing Strategies for Containing Avian Influenza Lee, Eva K. Liu, YiFan El-Tahawy, Abdelgawad Fasina, Folorunso O. 2023-04-29 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148328/ http://www.ncbi.nlm.nih.gov/pubmed/37128393 en eng American Medical Informatics Association http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148328/ http://www.ncbi.nlm.nih.gov/pubmed/37128393 ©2022 AMIA - All rights reserved. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose AMIA Annu Symp Proc Articles Text 2023 ftpubmed 2023-05-07T01:04:24Z In this paper, we couple a general-purpose infectious disease theory with a computational modeling framework to analyze strategies for avian influenza containment. We focus on virus transmission among domestic poultry populations to optimize and evaluate the effectiveness of three containment strategies and their combinations: reducing the contact rate among domestic birds, reducing the population of infected birds, and reducing the transportation of infected birds. We illustrate their usage during a two-wave avian flu outbreak in Nigeria. Our findings show that reducing contacts by 20% via cluster isolation early in the first wave can achieve containment rapidly. It also helps avert the second wave. Slaughtering infected birds is not as effective, requiring scheduled killings of over 80% of the poultry while failing to avert the second wave. This practice also risks damaging the local economy and potential secondary infections from the carcasses of infected birds. Reducing transportation between northern and southern Nigeria does not offer good containment since the disease spread began in both regions simultaneously. Reducing transportation has an impact when applied to neighboring regions and cities, or when the initial incidence of the disease is localized. Combination strategies prove to be the most practical and cost-effective to implement. The use of 3D-effectiveness visualized plots allows policymakers to evaluate multiple combination strategies and choose the one that optimizes containment while also adhering to budget constraints, resource availability, and management preference. The generalized mathematical theory and modeling framework is highly flexible and can be applied to other diseases, including those with multiple hosts, multiple species involvement, and across a broad array of heterogeneous regions. Text Avian flu PubMed Central (PMC)
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Articles
spellingShingle Articles
Lee, Eva K.
Liu, YiFan
El-Tahawy, Abdelgawad
Fasina, Folorunso O.
Analyzing Strategies for Containing Avian Influenza
topic_facet Articles
description In this paper, we couple a general-purpose infectious disease theory with a computational modeling framework to analyze strategies for avian influenza containment. We focus on virus transmission among domestic poultry populations to optimize and evaluate the effectiveness of three containment strategies and their combinations: reducing the contact rate among domestic birds, reducing the population of infected birds, and reducing the transportation of infected birds. We illustrate their usage during a two-wave avian flu outbreak in Nigeria. Our findings show that reducing contacts by 20% via cluster isolation early in the first wave can achieve containment rapidly. It also helps avert the second wave. Slaughtering infected birds is not as effective, requiring scheduled killings of over 80% of the poultry while failing to avert the second wave. This practice also risks damaging the local economy and potential secondary infections from the carcasses of infected birds. Reducing transportation between northern and southern Nigeria does not offer good containment since the disease spread began in both regions simultaneously. Reducing transportation has an impact when applied to neighboring regions and cities, or when the initial incidence of the disease is localized. Combination strategies prove to be the most practical and cost-effective to implement. The use of 3D-effectiveness visualized plots allows policymakers to evaluate multiple combination strategies and choose the one that optimizes containment while also adhering to budget constraints, resource availability, and management preference. The generalized mathematical theory and modeling framework is highly flexible and can be applied to other diseases, including those with multiple hosts, multiple species involvement, and across a broad array of heterogeneous regions.
format Text
author Lee, Eva K.
Liu, YiFan
El-Tahawy, Abdelgawad
Fasina, Folorunso O.
author_facet Lee, Eva K.
Liu, YiFan
El-Tahawy, Abdelgawad
Fasina, Folorunso O.
author_sort Lee, Eva K.
title Analyzing Strategies for Containing Avian Influenza
title_short Analyzing Strategies for Containing Avian Influenza
title_full Analyzing Strategies for Containing Avian Influenza
title_fullStr Analyzing Strategies for Containing Avian Influenza
title_full_unstemmed Analyzing Strategies for Containing Avian Influenza
title_sort analyzing strategies for containing avian influenza
publisher American Medical Informatics Association
publishDate 2023
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148328/
http://www.ncbi.nlm.nih.gov/pubmed/37128393
genre Avian flu
genre_facet Avian flu
op_source AMIA Annu Symp Proc
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10148328/
http://www.ncbi.nlm.nih.gov/pubmed/37128393
op_rights ©2022 AMIA - All rights reserved.
This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose
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