BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.

The study of animal sounds in biology and ecology relies heavily upon time-frequency (TF) visualisation, most commonly using the short-time Fourier transform (STFT) spectrogram. This method, however, has inherent bias towards either temporal or spectral details that can lead to misinterpretation of...

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Published in:Ecology and Evolution
Main Authors: Jancovich, Benjamin A, Rogers, Tracey L
Format: Article in Journal/Newspaper
Language:English
Published: PubMed Central 2024
Subjects:
Online Access:https://doi.org/10.1002/ece3.11636
https://pubmed.ncbi.nlm.nih.gov/38962019
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11220835/
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spelling ftpubmed:38962019 2024-09-15T18:00:03+00:00 BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds. Jancovich, Benjamin A Rogers, Tracey L 2024 Jul https://doi.org/10.1002/ece3.11636 https://pubmed.ncbi.nlm.nih.gov/38962019 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11220835/ eng eng PubMed Central https://doi.org/10.1002/ece3.11636 https://pubmed.ncbi.nlm.nih.gov/38962019 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11220835/ © 2024 The Author(s). Ecology and Evolution published by John Wiley & Sons Ltd. Ecol Evol ISSN:2045-7758 Volume:14 Issue:7 BASSA Fourier transform animal communication animal vocalisation bioacoustics phonation software spectrogram vocal production Journal Article 2024 ftpubmed https://doi.org/10.1002/ece3.11636 2024-07-05T16:01:00Z The study of animal sounds in biology and ecology relies heavily upon time-frequency (TF) visualisation, most commonly using the short-time Fourier transform (STFT) spectrogram. This method, however, has inherent bias towards either temporal or spectral details that can lead to misinterpretation of complex animal sounds. An ideal TF visualisation should accurately convey the structure of the sound in terms of both frequency and time, however, the STFT often cannot meet this requirement. We evaluate the accuracy of four TF visualisation methods (superlet transform [SLT], continuous wavelet transform [CWT] and two STFTs) using a synthetic test signal. We then apply these methods to visualise sounds of the Chagos blue whale, Asian elephant, southern cassowary, eastern whipbird, mulloway fish and the American crocodile. We show that the SLT visualises the test signal with 18.48%-28.08% less error than the other methods. A comparison between our visualisations of animal sounds and their literature descriptions indicates that the STFT's bias may have caused misinterpretations in describing pygmy blue whale songs and elephant rumbles. We suggest that use of the SLT to visualise low-frequency animal sounds may prevent such misinterpretations. Finally, we employ the SLT to develop 'BASSA', an open-source, GUI software application that offers a no-code, user-friendly tool for analysing short-duration recordings of low-frequency animal sounds for the Windows platform. The SLT visualises low-frequency animal sounds with improved accuracy, in a user-friendly format, minimising the risk of misinterpretation while requiring less technical expertise than the STFT. Using this method could propel advances in acoustics-driven studies of animal communication, vocal production methods, phonation and species identification. Article in Journal/Newspaper Blue whale PubMed Central (PMC) Ecology and Evolution 14 7
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic BASSA
Fourier transform
animal communication
animal vocalisation
bioacoustics
phonation
software
spectrogram
vocal production
spellingShingle BASSA
Fourier transform
animal communication
animal vocalisation
bioacoustics
phonation
software
spectrogram
vocal production
Jancovich, Benjamin A
Rogers, Tracey L
BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
topic_facet BASSA
Fourier transform
animal communication
animal vocalisation
bioacoustics
phonation
software
spectrogram
vocal production
description The study of animal sounds in biology and ecology relies heavily upon time-frequency (TF) visualisation, most commonly using the short-time Fourier transform (STFT) spectrogram. This method, however, has inherent bias towards either temporal or spectral details that can lead to misinterpretation of complex animal sounds. An ideal TF visualisation should accurately convey the structure of the sound in terms of both frequency and time, however, the STFT often cannot meet this requirement. We evaluate the accuracy of four TF visualisation methods (superlet transform [SLT], continuous wavelet transform [CWT] and two STFTs) using a synthetic test signal. We then apply these methods to visualise sounds of the Chagos blue whale, Asian elephant, southern cassowary, eastern whipbird, mulloway fish and the American crocodile. We show that the SLT visualises the test signal with 18.48%-28.08% less error than the other methods. A comparison between our visualisations of animal sounds and their literature descriptions indicates that the STFT's bias may have caused misinterpretations in describing pygmy blue whale songs and elephant rumbles. We suggest that use of the SLT to visualise low-frequency animal sounds may prevent such misinterpretations. Finally, we employ the SLT to develop 'BASSA', an open-source, GUI software application that offers a no-code, user-friendly tool for analysing short-duration recordings of low-frequency animal sounds for the Windows platform. The SLT visualises low-frequency animal sounds with improved accuracy, in a user-friendly format, minimising the risk of misinterpretation while requiring less technical expertise than the STFT. Using this method could propel advances in acoustics-driven studies of animal communication, vocal production methods, phonation and species identification.
format Article in Journal/Newspaper
author Jancovich, Benjamin A
Rogers, Tracey L
author_facet Jancovich, Benjamin A
Rogers, Tracey L
author_sort Jancovich, Benjamin A
title BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
title_short BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
title_full BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
title_fullStr BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
title_full_unstemmed BASSA: New software tool reveals hidden details in visualisation of low-frequency animal sounds.
title_sort bassa: new software tool reveals hidden details in visualisation of low-frequency animal sounds.
publisher PubMed Central
publishDate 2024
url https://doi.org/10.1002/ece3.11636
https://pubmed.ncbi.nlm.nih.gov/38962019
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11220835/
genre Blue whale
genre_facet Blue whale
op_source Ecol Evol
ISSN:2045-7758
Volume:14
Issue:7
op_relation https://doi.org/10.1002/ece3.11636
https://pubmed.ncbi.nlm.nih.gov/38962019
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11220835/
op_rights © 2024 The Author(s). Ecology and Evolution published by John Wiley & Sons Ltd.
op_doi https://doi.org/10.1002/ece3.11636
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