The saprotrophic

The Pleurotus ostreatus species complex is saprotrophic and of significant economic and ecological importance. However, species delimitation has long been problematic because of phenotypic plasticity and morphological stasis. In addition, the evolutionary history is poorly understood due to limited...

Full description

Bibliographic Details
Published in:IMA Fungus
Main Authors: Li, Jing, Han, Li-Hong, Liu, Xiao-Bin, Zhao, Zhi-Wei, Yang, Zhu L
Format: Article in Journal/Newspaper
Language:English
Published: BioMed Central 2020
Subjects:
Online Access:https://doi.org/10.1186/s43008-020-00031-1
https://pubmed.ncbi.nlm.nih.gov/32617259
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325090/
id ftpubmed:32617259
record_format openpolar
spelling ftpubmed:32617259 2024-09-15T17:59:20+00:00 The saprotrophic Li, Jing Han, Li-Hong Liu, Xiao-Bin Zhao, Zhi-Wei Yang, Zhu L 2020 https://doi.org/10.1186/s43008-020-00031-1 https://pubmed.ncbi.nlm.nih.gov/32617259 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325090/ eng eng BioMed Central https://doi.org/10.1186/s43008-020-00031-1 https://pubmed.ncbi.nlm.nih.gov/32617259 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325090/ © The Author(s) 2020. IMA Fungus ISSN:2210-6340 Volume:11 Diversification East Asian origin Illumina MiSeq Molecular phylogeny Saprotrophic mushrooms Species recognition Journal Article 2020 ftpubmed https://doi.org/10.1186/s43008-020-00031-1 2024-07-30T16:03:00Z The Pleurotus ostreatus species complex is saprotrophic and of significant economic and ecological importance. However, species delimitation has long been problematic because of phenotypic plasticity and morphological stasis. In addition, the evolutionary history is poorly understood due to limited sampling and insufficient gene fragments employed for phylogenetic analyses. Comprehensive sampling from Asia, Europe, North and South America and Africa was used to run phylogenetic analyses of the P. ostreatus species complex based on 40 nuclear single-copy orthologous genes using maximum likelihood and Bayesian inference analyses. Here, we present a robust phylogeny of the P. ostreatus species complex, fully resolved from the deepest nodes to species level. The P. ostreatus species complex was strongly supported as monophyletic, and 20 phylogenetic species were recognized, with seven putatively new species. Data from our molecular clock analyses suggested that divergence of the genus Pleurotus probably occurred in the late Jurassic, while the most recent common ancestor of the P. ostreatus species complex diversified about 39 Ma in East Asia. Species of the P. ostreatus complex might migrate from the East Asia into North America across the North Atlantic Land Bridge or the Bering Land Bridge at different times during the late Oligocene, late Miocene and late Pliocene, and then diversified in the Old and New Worlds simultaneously through multiple dispersal and vicariance events. The dispersal from East Asia to South America in the middle Oligocene was probably achieved by a long-distance dispersal event. Intensification of aridity and climate cooling events in the late Miocene and Quaternary glacial cycling probably had a significant influence on diversification patterns of the complex. The disjunctions among East Asia, Europe, North America and Africa within Clade IIc are hypothesized to be a result of allopatric speciation. Substrate transitions to Apiaceae probably occurred no earlier than 6 Ma. Biogeographic analyses suggested that the global cooling of the late Eocene, intensification of aridity caused by rapid uplift of the QTP and retreat of the Tethys Sea in the late Miocene, climate cooling events in Quaternary glacial cycling, and substrate transitions have contributed jointly to diversification of the species complex. Article in Journal/Newspaper Bering Land Bridge North Atlantic PubMed Central (PMC) IMA Fungus 11 1
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Diversification
East Asian origin
Illumina MiSeq
Molecular phylogeny
Saprotrophic mushrooms
Species recognition
spellingShingle Diversification
East Asian origin
Illumina MiSeq
Molecular phylogeny
Saprotrophic mushrooms
Species recognition
Li, Jing
Han, Li-Hong
Liu, Xiao-Bin
Zhao, Zhi-Wei
Yang, Zhu L
The saprotrophic
topic_facet Diversification
East Asian origin
Illumina MiSeq
Molecular phylogeny
Saprotrophic mushrooms
Species recognition
description The Pleurotus ostreatus species complex is saprotrophic and of significant economic and ecological importance. However, species delimitation has long been problematic because of phenotypic plasticity and morphological stasis. In addition, the evolutionary history is poorly understood due to limited sampling and insufficient gene fragments employed for phylogenetic analyses. Comprehensive sampling from Asia, Europe, North and South America and Africa was used to run phylogenetic analyses of the P. ostreatus species complex based on 40 nuclear single-copy orthologous genes using maximum likelihood and Bayesian inference analyses. Here, we present a robust phylogeny of the P. ostreatus species complex, fully resolved from the deepest nodes to species level. The P. ostreatus species complex was strongly supported as monophyletic, and 20 phylogenetic species were recognized, with seven putatively new species. Data from our molecular clock analyses suggested that divergence of the genus Pleurotus probably occurred in the late Jurassic, while the most recent common ancestor of the P. ostreatus species complex diversified about 39 Ma in East Asia. Species of the P. ostreatus complex might migrate from the East Asia into North America across the North Atlantic Land Bridge or the Bering Land Bridge at different times during the late Oligocene, late Miocene and late Pliocene, and then diversified in the Old and New Worlds simultaneously through multiple dispersal and vicariance events. The dispersal from East Asia to South America in the middle Oligocene was probably achieved by a long-distance dispersal event. Intensification of aridity and climate cooling events in the late Miocene and Quaternary glacial cycling probably had a significant influence on diversification patterns of the complex. The disjunctions among East Asia, Europe, North America and Africa within Clade IIc are hypothesized to be a result of allopatric speciation. Substrate transitions to Apiaceae probably occurred no earlier than 6 Ma. Biogeographic analyses suggested that the global cooling of the late Eocene, intensification of aridity caused by rapid uplift of the QTP and retreat of the Tethys Sea in the late Miocene, climate cooling events in Quaternary glacial cycling, and substrate transitions have contributed jointly to diversification of the species complex.
format Article in Journal/Newspaper
author Li, Jing
Han, Li-Hong
Liu, Xiao-Bin
Zhao, Zhi-Wei
Yang, Zhu L
author_facet Li, Jing
Han, Li-Hong
Liu, Xiao-Bin
Zhao, Zhi-Wei
Yang, Zhu L
author_sort Li, Jing
title The saprotrophic
title_short The saprotrophic
title_full The saprotrophic
title_fullStr The saprotrophic
title_full_unstemmed The saprotrophic
title_sort saprotrophic
publisher BioMed Central
publishDate 2020
url https://doi.org/10.1186/s43008-020-00031-1
https://pubmed.ncbi.nlm.nih.gov/32617259
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325090/
genre Bering Land Bridge
North Atlantic
genre_facet Bering Land Bridge
North Atlantic
op_source IMA Fungus
ISSN:2210-6340
Volume:11
op_relation https://doi.org/10.1186/s43008-020-00031-1
https://pubmed.ncbi.nlm.nih.gov/32617259
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325090/
op_rights © The Author(s) 2020.
op_doi https://doi.org/10.1186/s43008-020-00031-1
container_title IMA Fungus
container_volume 11
container_issue 1
_version_ 1810436419908272128