Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.

Barnacles and their allies (Thecostraca) are a biologically diverse, monophyletic crustacean group, which includes both intensely studied taxa, such as the acorn and stalked barnacles, as well as cryptic taxa, for example, Facetotecta. Recent efforts have clarified phylogenetic relationships in many...

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Published in:PeerJ
Main Authors: Ewers-Saucedo, Christine, Owen, Christopher L, Pérez-Losada, Marcos, Høeg, Jens T, Glenner, Henrik, Chan, Benny K K, Crandall, Keith A
Format: Article in Journal/Newspaper
Language:English
Published: PubMed Central 2019
Subjects:
Online Access:https://doi.org/10.7717/peerj.7387
https://pubmed.ncbi.nlm.nih.gov/31440430
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699479/
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spelling ftpubmed:31440430 2024-09-09T19:27:03+00:00 Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution. Ewers-Saucedo, Christine Owen, Christopher L Pérez-Losada, Marcos Høeg, Jens T Glenner, Henrik Chan, Benny K K Crandall, Keith A 2019 https://doi.org/10.7717/peerj.7387 https://pubmed.ncbi.nlm.nih.gov/31440430 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699479/ eng eng PubMed Central https://doi.org/10.7717/peerj.7387 https://pubmed.ncbi.nlm.nih.gov/31440430 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699479/ PeerJ ISSN:2167-8359 Volume:7 Barnacles Morphology Open tree of life Phylogenetic studies Synthesis tree Taxonomy Thecostraca Journal Article 2019 ftpubmed https://doi.org/10.7717/peerj.7387 2024-07-19T16:02:00Z Barnacles and their allies (Thecostraca) are a biologically diverse, monophyletic crustacean group, which includes both intensely studied taxa, such as the acorn and stalked barnacles, as well as cryptic taxa, for example, Facetotecta. Recent efforts have clarified phylogenetic relationships in many different parts of the barnacle tree, but the outcomes of these phylogenetic studies have not yet been combined into a single hypothesis for all barnacles. In the present study, we applied a new "synthesis" tree approach to estimate the first working Barnacle Tree of Life. Using this approach, we integrated phylogenetic hypotheses from 27 studies, which did not necessarily include the same taxa or used the same characters, with hierarchical taxonomic information for all recognized species. This first synthesis tree contains 2,070 barnacle species and subspecies, including 239 barnacle species with phylogenetic information and 198 undescribed or unidentified species. The tree had 442 bifurcating nodes, indicating that 79.3% of all nodes are still unresolved. We found that the acorn and stalked barnacles, the Thoracica, and the parasitic Rhizocephala have the largest amount of published phylogenetic information. About half of the thecostracan families for which phylogenetic information was available were polyphyletic. We queried publicly available geographic occurrence databases for the group, gaining a sense of geographic gaps and hotspots in our phylogenetic knowledge. Phylogenetic information is especially lacking for deep sea and Arctic taxa, but even coastal species are not fully incorporated into phylogenetic studies. Article in Journal/Newspaper Arctic PubMed Central (PMC) Arctic PeerJ 7 e7387
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Barnacles
Morphology
Open tree of life
Phylogenetic studies
Synthesis tree
Taxonomy
Thecostraca
spellingShingle Barnacles
Morphology
Open tree of life
Phylogenetic studies
Synthesis tree
Taxonomy
Thecostraca
Ewers-Saucedo, Christine
Owen, Christopher L
Pérez-Losada, Marcos
Høeg, Jens T
Glenner, Henrik
Chan, Benny K K
Crandall, Keith A
Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
topic_facet Barnacles
Morphology
Open tree of life
Phylogenetic studies
Synthesis tree
Taxonomy
Thecostraca
description Barnacles and their allies (Thecostraca) are a biologically diverse, monophyletic crustacean group, which includes both intensely studied taxa, such as the acorn and stalked barnacles, as well as cryptic taxa, for example, Facetotecta. Recent efforts have clarified phylogenetic relationships in many different parts of the barnacle tree, but the outcomes of these phylogenetic studies have not yet been combined into a single hypothesis for all barnacles. In the present study, we applied a new "synthesis" tree approach to estimate the first working Barnacle Tree of Life. Using this approach, we integrated phylogenetic hypotheses from 27 studies, which did not necessarily include the same taxa or used the same characters, with hierarchical taxonomic information for all recognized species. This first synthesis tree contains 2,070 barnacle species and subspecies, including 239 barnacle species with phylogenetic information and 198 undescribed or unidentified species. The tree had 442 bifurcating nodes, indicating that 79.3% of all nodes are still unresolved. We found that the acorn and stalked barnacles, the Thoracica, and the parasitic Rhizocephala have the largest amount of published phylogenetic information. About half of the thecostracan families for which phylogenetic information was available were polyphyletic. We queried publicly available geographic occurrence databases for the group, gaining a sense of geographic gaps and hotspots in our phylogenetic knowledge. Phylogenetic information is especially lacking for deep sea and Arctic taxa, but even coastal species are not fully incorporated into phylogenetic studies.
format Article in Journal/Newspaper
author Ewers-Saucedo, Christine
Owen, Christopher L
Pérez-Losada, Marcos
Høeg, Jens T
Glenner, Henrik
Chan, Benny K K
Crandall, Keith A
author_facet Ewers-Saucedo, Christine
Owen, Christopher L
Pérez-Losada, Marcos
Høeg, Jens T
Glenner, Henrik
Chan, Benny K K
Crandall, Keith A
author_sort Ewers-Saucedo, Christine
title Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
title_short Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
title_full Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
title_fullStr Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
title_full_unstemmed Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
title_sort towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution.
publisher PubMed Central
publishDate 2019
url https://doi.org/10.7717/peerj.7387
https://pubmed.ncbi.nlm.nih.gov/31440430
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699479/
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source PeerJ
ISSN:2167-8359
Volume:7
op_relation https://doi.org/10.7717/peerj.7387
https://pubmed.ncbi.nlm.nih.gov/31440430
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699479/
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