Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents
The methane-rich areas, the Loki's Castle vent field and the Jan Mayen vent field at the Arctic Mid Ocean Ridge (AMOR), host abundant niches for anaerobic methane-oxidizers, which are predominantly filled by members of the ANME-1. In this study, we used a metagenomic-based approach that reveale...
Published in: | FEMS Microbiology Ecology |
---|---|
Main Authors: | , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
2022
|
Subjects: | |
Online Access: | http://hdl.handle.net/21.11116/0000-000C-76B0-8 http://hdl.handle.net/21.11116/0000-000C-76B2-6 |
id |
ftpubman:oai:pure.mpg.de:item_3487782 |
---|---|
record_format |
openpolar |
spelling |
ftpubman:oai:pure.mpg.de:item_3487782 2023-08-27T04:07:31+02:00 Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents Vulcano, F. Hahn, C. Roerdink, D. Dahle, H. Reeves, E. Wegener, G. Steen, I. Stokke, R. 2022-10-03 application/pdf http://hdl.handle.net/21.11116/0000-000C-76B0-8 http://hdl.handle.net/21.11116/0000-000C-76B2-6 eng eng info:eu-repo/semantics/altIdentifier/doi/10.1093/femsec/fiac117 http://hdl.handle.net/21.11116/0000-000C-76B0-8 http://hdl.handle.net/21.11116/0000-000C-76B2-6 info:eu-repo/semantics/openAccess FEMS MICROBIOLOGY ECOLOGY info:eu-repo/semantics/article 2022 ftpubman https://doi.org/10.1093/femsec/fiac117 2023-08-02T01:38:08Z The methane-rich areas, the Loki's Castle vent field and the Jan Mayen vent field at the Arctic Mid Ocean Ridge (AMOR), host abundant niches for anaerobic methane-oxidizers, which are predominantly filled by members of the ANME-1. In this study, we used a metagenomic-based approach that revealed the presence of phylogenetic and functional different ANME-1 subgroups at AMOR, with heterogeneous distribution. Based on a common analysis of ANME-1 genomes from AMOR and other geographic locations, we observed that AMOR subgroups clustered with a vent-specific ANME-1 group that occurs solely at vents, and with a generalist ANME-1 group, with a mixed environmental origin. Generalist ANME-1 are enriched in genes coding for stress response and defense strategies, suggesting functional diversity among AMOR subgroups. ANME-1 encode a conserved energy metabolism, indicating strong adaptation to sulfate-methane-rich sediments in marine systems, which does not however prevent global dispersion. A deep branching family named Ca. Veteromethanophagaceae was identified. The basal position of vent-related ANME-1 in phylogenomic trees suggests that ANME-1 originated at hydrothermal vents. The heterogeneous and variable physicochemical conditions present in diffuse venting areas of hydrothermal fields could have favored the diversification of ANME-1 into lineages that can tolerate geochemical and environmental variations. Phylogenomics and functional analysis of ANME-1 anaerobic methane oxidizers from hydrothermal systems at the Arctic Mid Ocean Ridge. Article in Journal/Newspaper Arctic Jan Mayen Max Planck Society: MPG.PuRe Arctic Jan Mayen FEMS Microbiology Ecology 98 11 |
institution |
Open Polar |
collection |
Max Planck Society: MPG.PuRe |
op_collection_id |
ftpubman |
language |
English |
description |
The methane-rich areas, the Loki's Castle vent field and the Jan Mayen vent field at the Arctic Mid Ocean Ridge (AMOR), host abundant niches for anaerobic methane-oxidizers, which are predominantly filled by members of the ANME-1. In this study, we used a metagenomic-based approach that revealed the presence of phylogenetic and functional different ANME-1 subgroups at AMOR, with heterogeneous distribution. Based on a common analysis of ANME-1 genomes from AMOR and other geographic locations, we observed that AMOR subgroups clustered with a vent-specific ANME-1 group that occurs solely at vents, and with a generalist ANME-1 group, with a mixed environmental origin. Generalist ANME-1 are enriched in genes coding for stress response and defense strategies, suggesting functional diversity among AMOR subgroups. ANME-1 encode a conserved energy metabolism, indicating strong adaptation to sulfate-methane-rich sediments in marine systems, which does not however prevent global dispersion. A deep branching family named Ca. Veteromethanophagaceae was identified. The basal position of vent-related ANME-1 in phylogenomic trees suggests that ANME-1 originated at hydrothermal vents. The heterogeneous and variable physicochemical conditions present in diffuse venting areas of hydrothermal fields could have favored the diversification of ANME-1 into lineages that can tolerate geochemical and environmental variations. Phylogenomics and functional analysis of ANME-1 anaerobic methane oxidizers from hydrothermal systems at the Arctic Mid Ocean Ridge. |
format |
Article in Journal/Newspaper |
author |
Vulcano, F. Hahn, C. Roerdink, D. Dahle, H. Reeves, E. Wegener, G. Steen, I. Stokke, R. |
spellingShingle |
Vulcano, F. Hahn, C. Roerdink, D. Dahle, H. Reeves, E. Wegener, G. Steen, I. Stokke, R. Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
author_facet |
Vulcano, F. Hahn, C. Roerdink, D. Dahle, H. Reeves, E. Wegener, G. Steen, I. Stokke, R. |
author_sort |
Vulcano, F. |
title |
Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
title_short |
Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
title_full |
Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
title_fullStr |
Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
title_full_unstemmed |
Phylogenetic and functional diverse ANME-1 thrive in Arctic hydrothermal vents |
title_sort |
phylogenetic and functional diverse anme-1 thrive in arctic hydrothermal vents |
publishDate |
2022 |
url |
http://hdl.handle.net/21.11116/0000-000C-76B0-8 http://hdl.handle.net/21.11116/0000-000C-76B2-6 |
geographic |
Arctic Jan Mayen |
geographic_facet |
Arctic Jan Mayen |
genre |
Arctic Jan Mayen |
genre_facet |
Arctic Jan Mayen |
op_source |
FEMS MICROBIOLOGY ECOLOGY |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1093/femsec/fiac117 http://hdl.handle.net/21.11116/0000-000C-76B0-8 http://hdl.handle.net/21.11116/0000-000C-76B2-6 |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1093/femsec/fiac117 |
container_title |
FEMS Microbiology Ecology |
container_volume |
98 |
container_issue |
11 |
_version_ |
1775348278654664704 |