Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean

Fluorescence in situ hybridization (FISH) in combination with polynucleotide probes revealed that the two major groups of planktonic Archaea (Crenarchaeota and Euryarchaeota) exhibit a different distribution pattern in the water column of the Pacific subtropical gyre and in the Antarctic Circumpolar...

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Main Authors: Herndl, G., Reinthaler, T., Teira, E., van Aken, H., Veth, C., Pernthaler, A., Pernthaler, J.
Format: Article in Journal/Newspaper
Language:English
Published: 2005
Subjects:
Online Access:http://hdl.handle.net/21.11116/0000-0001-D03D-0
http://hdl.handle.net/21.11116/0000-0007-8EEB-1
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spelling ftpubman:oai:pure.mpg.de:item_2485731 2023-08-20T04:00:29+02:00 Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean Herndl, G. Reinthaler, T. Teira, E. van Aken, H. Veth, C. Pernthaler, A. Pernthaler, J. 2005-05 application/pdf http://hdl.handle.net/21.11116/0000-0001-D03D-0 http://hdl.handle.net/21.11116/0000-0007-8EEB-1 eng eng http://hdl.handle.net/21.11116/0000-0001-D03D-0 http://hdl.handle.net/21.11116/0000-0007-8EEB-1 info:eu-repo/semantics/openAccess Applied and Environmental Microbiology info:eu-repo/semantics/article 2005 ftpubman 2023-08-01T23:08:11Z Fluorescence in situ hybridization (FISH) in combination with polynucleotide probes revealed that the two major groups of planktonic Archaea (Crenarchaeota and Euryarchaeota) exhibit a different distribution pattern in the water column of the Pacific subtropical gyre and in the Antarctic Circumpolar Current system. While Euryarchaeota were found to be more dominant in nearsurface waters, Crenarchaeota were relatively more abundant in the mesopelagic and bathypelagic waters. We determined the abundance of archaea in the mesopelagic and bathypelagic North Atlantic along a south-north transect of more than 4,000 km. Using an improved catalyzed reporter deposition-FISH (CARD-FISH) method and specific oligonucleotide probes, we found that archaea were consistently more abundant than bacteria below a 100-m depth. Combining microautoradiography with CARD-FISH revealed a high fraction of metabolically active cells in the deep ocean. Even at a 3,000-m depth, about 16% of the bacteria were taking up leucine. The percentage of Euryarchaeota and Crenarchaeaota taking up leucine did not follow a specific trend, with depths ranging from 6 to 35% and 3 to 18%, respectively. The fraction of Crenarchaeota taking up inorganic carbon increased with depth, while Euryarchaeota taking up inorganic carbon decreased from 200 m to 3,000 m in depth. The ability of archaea to take up inorganic carbon was used as a proxy to estimate archaeal cell production and to compare this archaeal production with total prokaryotic production measured via leucine incorporation. We estimate that archaeal production in the mesopelagic and bathypelagic North Atlantic contributes between 13 to 27% to the total prokaryotic production in the oxygen minimum layer and 41 to 84% in the Labrador Sea Water, declining to 10 to 20% in the North Atlantic Deep Water. Thus, planktonic archaea are actively growing in the dark ocean although at lower growth rates than bacteria and might play a significant role in the oceanic carbon cycle. Article in Journal/Newspaper Antarc* Antarctic Labrador Sea North Atlantic Deep Water North Atlantic Max Planck Society: MPG.PuRe Antarctic Pacific The Antarctic
institution Open Polar
collection Max Planck Society: MPG.PuRe
op_collection_id ftpubman
language English
description Fluorescence in situ hybridization (FISH) in combination with polynucleotide probes revealed that the two major groups of planktonic Archaea (Crenarchaeota and Euryarchaeota) exhibit a different distribution pattern in the water column of the Pacific subtropical gyre and in the Antarctic Circumpolar Current system. While Euryarchaeota were found to be more dominant in nearsurface waters, Crenarchaeota were relatively more abundant in the mesopelagic and bathypelagic waters. We determined the abundance of archaea in the mesopelagic and bathypelagic North Atlantic along a south-north transect of more than 4,000 km. Using an improved catalyzed reporter deposition-FISH (CARD-FISH) method and specific oligonucleotide probes, we found that archaea were consistently more abundant than bacteria below a 100-m depth. Combining microautoradiography with CARD-FISH revealed a high fraction of metabolically active cells in the deep ocean. Even at a 3,000-m depth, about 16% of the bacteria were taking up leucine. The percentage of Euryarchaeota and Crenarchaeaota taking up leucine did not follow a specific trend, with depths ranging from 6 to 35% and 3 to 18%, respectively. The fraction of Crenarchaeota taking up inorganic carbon increased with depth, while Euryarchaeota taking up inorganic carbon decreased from 200 m to 3,000 m in depth. The ability of archaea to take up inorganic carbon was used as a proxy to estimate archaeal cell production and to compare this archaeal production with total prokaryotic production measured via leucine incorporation. We estimate that archaeal production in the mesopelagic and bathypelagic North Atlantic contributes between 13 to 27% to the total prokaryotic production in the oxygen minimum layer and 41 to 84% in the Labrador Sea Water, declining to 10 to 20% in the North Atlantic Deep Water. Thus, planktonic archaea are actively growing in the dark ocean although at lower growth rates than bacteria and might play a significant role in the oceanic carbon cycle.
format Article in Journal/Newspaper
author Herndl, G.
Reinthaler, T.
Teira, E.
van Aken, H.
Veth, C.
Pernthaler, A.
Pernthaler, J.
spellingShingle Herndl, G.
Reinthaler, T.
Teira, E.
van Aken, H.
Veth, C.
Pernthaler, A.
Pernthaler, J.
Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
author_facet Herndl, G.
Reinthaler, T.
Teira, E.
van Aken, H.
Veth, C.
Pernthaler, A.
Pernthaler, J.
author_sort Herndl, G.
title Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
title_short Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
title_full Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
title_fullStr Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
title_full_unstemmed Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
title_sort contribution of archaea to total prokaryotic production in the deep atlantic ocean
publishDate 2005
url http://hdl.handle.net/21.11116/0000-0001-D03D-0
http://hdl.handle.net/21.11116/0000-0007-8EEB-1
geographic Antarctic
Pacific
The Antarctic
geographic_facet Antarctic
Pacific
The Antarctic
genre Antarc*
Antarctic
Labrador Sea
North Atlantic Deep Water
North Atlantic
genre_facet Antarc*
Antarctic
Labrador Sea
North Atlantic Deep Water
North Atlantic
op_source Applied and Environmental Microbiology
op_relation http://hdl.handle.net/21.11116/0000-0001-D03D-0
http://hdl.handle.net/21.11116/0000-0007-8EEB-1
op_rights info:eu-repo/semantics/openAccess
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