Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula
A novel bacterium, designated strain F028-2(T), was isolated from seawater at Damupo beach in Pohang, Korea, and investigated in a taxonomic study using a polyphasic approach. This novel strain was strictly aerobic, non-motile, Gram-stain-negative and rod-shaped, and occasionally formed aggregates....
Published in: | International Journal of Systematic and Evolutionary Microbiology |
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SOC GENERAL MICROBIOLOGY
2013
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Online Access: | https://oasis.postech.ac.kr/handle/2014.oak/15020 https://doi.org/10.1099/IJS.0.040766-0 |
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ftponangunivst:oai:oasis.postech.ac.kr:2014.oak/15020 2023-05-15T13:52:55+02:00 Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula Lee, DH Cho, SJ Kim, SM Lee, SB 엔지니어링 대학원 10105619 Lee, SB 2013-06 https://oasis.postech.ac.kr/handle/2014.oak/15020 https://doi.org/10.1099/IJS.0.040766-0 English eng SOC GENERAL MICROBIOLOGY INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 63 2101 2107 SCI급, SCOPUS 등재논문 SCIE Microbiology 1466-5026 2013-OAK-0000028828 https://oasis.postech.ac.kr/handle/2014.oak/15020 doi:10.1099/IJS.0.040766-0 15237 INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.63, pp.2101 - 2107 000322348700026 2-s2.0-84878859984 ELECTROACTIVE BIOFILM CLASS PROTEOBACTERIA DEGRADING BACTERIUM ALPHA-SUBCLASS COMB. NOV RUEGERIA ROSEOBACTER SEQUENCES DNA RECLASSIFICATION Article ART 2013 ftponangunivst https://doi.org/10.1099/IJS.0.040766-0 2022-10-20T20:09:38Z A novel bacterium, designated strain F028-2(T), was isolated from seawater at Damupo beach in Pohang, Korea, and investigated in a taxonomic study using a polyphasic approach. This novel strain was strictly aerobic, non-motile, Gram-stain-negative and rod-shaped, and occasionally formed aggregates. The temperature, pH and NaCl ranges for growth were 4-30 degrees C, pH 6.5-9.0 and 1-7% (w/v), respectively. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain F028-2(T). formed a lineage within the family Rhodobacteraceae of the class Alphaproteobacteria, and was closely related to members of the genera Sagittula and Antarctobacter with 96.3-96.4% sequence similarities. The polar lipid profile of strain F028-2(T) comprised diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids, one unidentified phospholipid and six unidentified lipids. The predominant cellular fatty acids were C-18:1 omega 7c and C-12:1 3-OH. The genomic DNA G+C content of strain F028-2(T) was 61.6 mol% and the major respiratory quinone was Q-10. Based on phenotypic, phylogenetic and genotypic data, strain F028-2(T). is considered to represent a novel species in the genus Sagittula, for which the name Sagittula marina sp. nov. is proposed. The type strain is F028-2(T) (=KCTC 23543(T)=JCM 17627(T)). An emended description of the genus Sagittula is also proposed. X 1 1 2 3 scie scopus Article in Journal/Newspaper Antarc* Pohang University of Science and Technology (POSTECH): Open Access System for Information Sharing (OASIS) International Journal of Systematic and Evolutionary Microbiology 63 Pt_6 2101 2107 |
institution |
Open Polar |
collection |
Pohang University of Science and Technology (POSTECH): Open Access System for Information Sharing (OASIS) |
op_collection_id |
ftponangunivst |
language |
English |
topic |
ELECTROACTIVE BIOFILM CLASS PROTEOBACTERIA DEGRADING BACTERIUM ALPHA-SUBCLASS COMB. NOV RUEGERIA ROSEOBACTER SEQUENCES DNA RECLASSIFICATION |
spellingShingle |
ELECTROACTIVE BIOFILM CLASS PROTEOBACTERIA DEGRADING BACTERIUM ALPHA-SUBCLASS COMB. NOV RUEGERIA ROSEOBACTER SEQUENCES DNA RECLASSIFICATION Lee, DH Cho, SJ Kim, SM Lee, SB Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
topic_facet |
ELECTROACTIVE BIOFILM CLASS PROTEOBACTERIA DEGRADING BACTERIUM ALPHA-SUBCLASS COMB. NOV RUEGERIA ROSEOBACTER SEQUENCES DNA RECLASSIFICATION |
description |
A novel bacterium, designated strain F028-2(T), was isolated from seawater at Damupo beach in Pohang, Korea, and investigated in a taxonomic study using a polyphasic approach. This novel strain was strictly aerobic, non-motile, Gram-stain-negative and rod-shaped, and occasionally formed aggregates. The temperature, pH and NaCl ranges for growth were 4-30 degrees C, pH 6.5-9.0 and 1-7% (w/v), respectively. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain F028-2(T). formed a lineage within the family Rhodobacteraceae of the class Alphaproteobacteria, and was closely related to members of the genera Sagittula and Antarctobacter with 96.3-96.4% sequence similarities. The polar lipid profile of strain F028-2(T) comprised diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids, one unidentified phospholipid and six unidentified lipids. The predominant cellular fatty acids were C-18:1 omega 7c and C-12:1 3-OH. The genomic DNA G+C content of strain F028-2(T) was 61.6 mol% and the major respiratory quinone was Q-10. Based on phenotypic, phylogenetic and genotypic data, strain F028-2(T). is considered to represent a novel species in the genus Sagittula, for which the name Sagittula marina sp. nov. is proposed. The type strain is F028-2(T) (=KCTC 23543(T)=JCM 17627(T)). An emended description of the genus Sagittula is also proposed. X 1 1 2 3 scie scopus |
author2 |
엔지니어링 대학원 10105619 Lee, SB |
format |
Article in Journal/Newspaper |
author |
Lee, DH Cho, SJ Kim, SM Lee, SB |
author_facet |
Lee, DH Cho, SJ Kim, SM Lee, SB |
author_sort |
Lee, DH |
title |
Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
title_short |
Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
title_full |
Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
title_fullStr |
Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
title_full_unstemmed |
Sagittula marina sp nov., isolated from seawater and emended description of the genus Sagittula |
title_sort |
sagittula marina sp nov., isolated from seawater and emended description of the genus sagittula |
publisher |
SOC GENERAL MICROBIOLOGY |
publishDate |
2013 |
url |
https://oasis.postech.ac.kr/handle/2014.oak/15020 https://doi.org/10.1099/IJS.0.040766-0 |
genre |
Antarc* |
genre_facet |
Antarc* |
op_relation |
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 63 2101 2107 SCI급, SCOPUS 등재논문 SCIE Microbiology 1466-5026 2013-OAK-0000028828 https://oasis.postech.ac.kr/handle/2014.oak/15020 doi:10.1099/IJS.0.040766-0 15237 INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.63, pp.2101 - 2107 000322348700026 2-s2.0-84878859984 |
op_doi |
https://doi.org/10.1099/IJS.0.040766-0 |
container_title |
International Journal of Systematic and Evolutionary Microbiology |
container_volume |
63 |
container_issue |
Pt_6 |
container_start_page |
2101 |
op_container_end_page |
2107 |
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1766257765354831872 |