A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies

Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation of the Amphipoda sampled during two IceAGE collecting e...

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Published in:ZooKeys
Main Authors: Jażdżewska,Anna, Corbari,Laure, Driskell,Amy, Frutos,Inmaculada, Havermans,Charlotte, Hendrycks,Ed, Hughes,Lauren, Lörz,Anne-Nina, Stransky,Bente, Tandberg,Anne Helene S., Vader,Willem Jan Marinus, Brix,Saskia
Format: Article in Journal/Newspaper
Language:English
Published: Pensoft Publishers 2018
Subjects:
Online Access:https://doi.org/10.3897/zookeys.731.19931
https://zookeys.pensoft.net/article/19931/
id ftpensoft:10.3897/zookeys.731.19931
record_format openpolar
spelling ftpensoft:10.3897/zookeys.731.19931 2023-05-15T17:34:15+02:00 A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies Jażdżewska,Anna Corbari,Laure Driskell,Amy Frutos,Inmaculada Havermans,Charlotte Hendrycks,Ed Hughes,Lauren Lörz,Anne-Nina Stransky,Bente Tandberg,Anne Helene S. Vader,Willem Jan Marinus Brix,Saskia 2018 text/html https://doi.org/10.3897/zookeys.731.19931 https://zookeys.pensoft.net/article/19931/ en eng Pensoft Publishers info:eu-repo/semantics/altIdentifier/eissn/1313-2970 info:eu-repo/semantics/altIdentifier/pissn/1313-2989 info:eu-repo/semantics/openAccess ZooKeys 731: 55-73 Amphipoda COI barcoding deep sea North Atlantic Research Article 2018 ftpensoft https://doi.org/10.3897/zookeys.731.19931 2022-03-01T12:36:09Z Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation of the Amphipoda sampled during two IceAGE collecting expeditions. The mitochondrial cytochrome oxidase subunit 1 (COI) of 167 individuals originally assigned to 75 morphospecies was analysed. These targeted morhospecies were readily identifiable by experts using light microscopy and representative of families where there is current ongoing taxonomic research. The study resulted in 81 Barcode Identity Numbers (BINs) (of which >90% were published for the first time), while Automatic Barcode Gap Discovery revealed the existence of 78 to 83 Molecular Operational Taxonomic Units (MOTUs). Six nominal species (Rhachotropis helleri, Arrhis phyllonyx, Deflexilodes tenuirostratus, Paroediceros propinquus, Metopa boeckii, Astyra abyssi) appeared to have a molecular variation higher than the 0.03 threshold of both p-distance and K2P usually used for amphipod species delineation. Conversely, two Oedicerotidae regarded as separate morphospecies clustered together with divergences in the order of intraspecific variation. The incongruence between the BINs associated with presently identified species and the publicly available data of the same taxa was observed in case of Paramphithoe hystrix and Amphilochus manudens. The findings from this research project highlight the necessity of supporting molecular studies with thorough morphology species analyses. Article in Journal/Newspaper North Atlantic Pensoft Publishers ZooKeys 731 55 73
institution Open Polar
collection Pensoft Publishers
op_collection_id ftpensoft
language English
topic Amphipoda
COI barcoding
deep sea
North Atlantic
spellingShingle Amphipoda
COI barcoding
deep sea
North Atlantic
Jażdżewska,Anna
Corbari,Laure
Driskell,Amy
Frutos,Inmaculada
Havermans,Charlotte
Hendrycks,Ed
Hughes,Lauren
Lörz,Anne-Nina
Stransky,Bente
Tandberg,Anne Helene S.
Vader,Willem Jan Marinus
Brix,Saskia
A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
topic_facet Amphipoda
COI barcoding
deep sea
North Atlantic
description Amphipods constitute an abundant part of Icelandic deep-sea zoobenthos yet knowledge of the diversity of this fauna, particularly at the molecular level, is scarce. The present work aims to use molecular methods to investigate genetic variation of the Amphipoda sampled during two IceAGE collecting expeditions. The mitochondrial cytochrome oxidase subunit 1 (COI) of 167 individuals originally assigned to 75 morphospecies was analysed. These targeted morhospecies were readily identifiable by experts using light microscopy and representative of families where there is current ongoing taxonomic research. The study resulted in 81 Barcode Identity Numbers (BINs) (of which >90% were published for the first time), while Automatic Barcode Gap Discovery revealed the existence of 78 to 83 Molecular Operational Taxonomic Units (MOTUs). Six nominal species (Rhachotropis helleri, Arrhis phyllonyx, Deflexilodes tenuirostratus, Paroediceros propinquus, Metopa boeckii, Astyra abyssi) appeared to have a molecular variation higher than the 0.03 threshold of both p-distance and K2P usually used for amphipod species delineation. Conversely, two Oedicerotidae regarded as separate morphospecies clustered together with divergences in the order of intraspecific variation. The incongruence between the BINs associated with presently identified species and the publicly available data of the same taxa was observed in case of Paramphithoe hystrix and Amphilochus manudens. The findings from this research project highlight the necessity of supporting molecular studies with thorough morphology species analyses.
format Article in Journal/Newspaper
author Jażdżewska,Anna
Corbari,Laure
Driskell,Amy
Frutos,Inmaculada
Havermans,Charlotte
Hendrycks,Ed
Hughes,Lauren
Lörz,Anne-Nina
Stransky,Bente
Tandberg,Anne Helene S.
Vader,Willem Jan Marinus
Brix,Saskia
author_facet Jażdżewska,Anna
Corbari,Laure
Driskell,Amy
Frutos,Inmaculada
Havermans,Charlotte
Hendrycks,Ed
Hughes,Lauren
Lörz,Anne-Nina
Stransky,Bente
Tandberg,Anne Helene S.
Vader,Willem Jan Marinus
Brix,Saskia
author_sort Jażdżewska,Anna
title A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_short A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_full A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_fullStr A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_full_unstemmed A genetic fingerprint of Amphipoda from Icelandic waters – the baseline for further biodiversity and biogeography studies
title_sort genetic fingerprint of amphipoda from icelandic waters – the baseline for further biodiversity and biogeography studies
publisher Pensoft Publishers
publishDate 2018
url https://doi.org/10.3897/zookeys.731.19931
https://zookeys.pensoft.net/article/19931/
genre North Atlantic
genre_facet North Atlantic
op_source ZooKeys 731: 55-73
op_relation info:eu-repo/semantics/altIdentifier/eissn/1313-2970
info:eu-repo/semantics/altIdentifier/pissn/1313-2989
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.3897/zookeys.731.19931
container_title ZooKeys
container_volume 731
container_start_page 55
op_container_end_page 73
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