Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea)
This circumpolar dataset of the comatulid (Echinodermata: Crinoidea) Promachocrinus kerguelensis (Carpenter, 1888) from the Southern Ocean, documents biodiversity associated with the specimens sequenced in Hemery et al. (2012). The aim of Hemery et al. (2012) paper was to use phylogeographic and phy...
Published in: | ZooKeys |
---|---|
Main Authors: | , , |
Format: | Other/Unknown Material |
Language: | English |
Published: |
Pensoft Publishers
2013
|
Subjects: | |
Online Access: | https://doi.org/10.3897/zookeys.315.5673 https://zookeys.pensoft.net/article/3326/ |
id |
ftpensoft:10.3897/zookeys.315.5673 |
---|---|
record_format |
openpolar |
spelling |
ftpensoft:10.3897/zookeys.315.5673 2023-05-15T13:24:14+02:00 Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) Hemery,Lenaig Améziane,Nadia Eleaume,Marc 2013 text/html https://doi.org/10.3897/zookeys.315.5673 https://zookeys.pensoft.net/article/3326/ en eng Pensoft Publishers info:eu-repo/semantics/altIdentifier/eissn/1313-2970 info:eu-repo/semantics/altIdentifier/pissn/1313-2989 info:eu-repo/semantics/openAccess ZooKeys 315: 55-64 Antarctica Crinoidea Cytochrome Oxydase subunit I Echinodermata Phylogeography Promachocrinus Southern Ocean Sub-Antarctic Data Paper 2013 ftpensoft https://doi.org/10.3897/zookeys.315.5673 2022-03-01T12:27:37Z This circumpolar dataset of the comatulid (Echinodermata: Crinoidea) Promachocrinus kerguelensis (Carpenter, 1888) from the Southern Ocean, documents biodiversity associated with the specimens sequenced in Hemery et al. (2012). The aim of Hemery et al. (2012) paper was to use phylogeographic and phylogenetic tools to assess the genetic diversity, demographic history and evolutionary relationships of this very common and abundant comatulid, in the context of the glacial history of the Antarctic and Sub-Antarctic shelves (Thatje et al. 2005, 2008). Over one thousand three hundred specimens (1307) used in this study were collected during seventeen cruises from 1996 to 2010, in eight regions of the Southern Ocean: Kerguelen Plateau, Davis Sea, Dumont d’Urville Sea, Ross Sea, Amundsen Sea, West Antarctic Peninsula, East Weddell Sea and Scotia Arc including the tip of the Antarctic Peninsula and the Bransfield Strait. We give here the metadata of this dataset, which lists sampling sources (cruise ID, ship name, sampling date, sampling gear), sampling sites (station, geographic coordinates, depth) and genetic data (phylogroup, haplotype, sequence ID) for each of the 1307 specimens. The identification of the specimens was controlled by an expert taxonomist specialist of crinoids (Marc Eléaume, Muséum national d’Histoire naturelle, Paris) and all the COI sequences were matched against those available on the Barcode of Life Data System (BOLD: http://www.boldsystems.org/index.php/IDS_OpenIdEngine). This dataset can be used by studies dealing with, among other interests, Antarctic and/or crinoid diversity (species richness, distribution patterns), biogeography or habitat / ecological niche modeling. This dataset is accessible through the GBIF network at http://ipt.biodiversity.aq/resource.do?r=proke. Other/Unknown Material Amundsen Sea Antarc* Antarctic Antarctic Peninsula Antarctica Bransfield Strait Davis Sea D’Urville Sea Ross Sea Southern Ocean Weddell Sea Pensoft Publishers Amundsen Sea Antarctic Antarctic Peninsula Bransfield Strait Davis Sea ENVELOPE(93.500,93.500,-66.000,-66.000) Dumont d’Urville ENVELOPE(140.000,140.000,-66.667,-66.667) Kerguelen Ross Sea Southern Ocean The Antarctic Weddell Weddell Sea ZooKeys 315 55 64 |
institution |
Open Polar |
collection |
Pensoft Publishers |
op_collection_id |
ftpensoft |
language |
English |
topic |
Antarctica Crinoidea Cytochrome Oxydase subunit I Echinodermata Phylogeography Promachocrinus Southern Ocean Sub-Antarctic |
spellingShingle |
Antarctica Crinoidea Cytochrome Oxydase subunit I Echinodermata Phylogeography Promachocrinus Southern Ocean Sub-Antarctic Hemery,Lenaig Améziane,Nadia Eleaume,Marc Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
topic_facet |
Antarctica Crinoidea Cytochrome Oxydase subunit I Echinodermata Phylogeography Promachocrinus Southern Ocean Sub-Antarctic |
description |
This circumpolar dataset of the comatulid (Echinodermata: Crinoidea) Promachocrinus kerguelensis (Carpenter, 1888) from the Southern Ocean, documents biodiversity associated with the specimens sequenced in Hemery et al. (2012). The aim of Hemery et al. (2012) paper was to use phylogeographic and phylogenetic tools to assess the genetic diversity, demographic history and evolutionary relationships of this very common and abundant comatulid, in the context of the glacial history of the Antarctic and Sub-Antarctic shelves (Thatje et al. 2005, 2008). Over one thousand three hundred specimens (1307) used in this study were collected during seventeen cruises from 1996 to 2010, in eight regions of the Southern Ocean: Kerguelen Plateau, Davis Sea, Dumont d’Urville Sea, Ross Sea, Amundsen Sea, West Antarctic Peninsula, East Weddell Sea and Scotia Arc including the tip of the Antarctic Peninsula and the Bransfield Strait. We give here the metadata of this dataset, which lists sampling sources (cruise ID, ship name, sampling date, sampling gear), sampling sites (station, geographic coordinates, depth) and genetic data (phylogroup, haplotype, sequence ID) for each of the 1307 specimens. The identification of the specimens was controlled by an expert taxonomist specialist of crinoids (Marc Eléaume, Muséum national d’Histoire naturelle, Paris) and all the COI sequences were matched against those available on the Barcode of Life Data System (BOLD: http://www.boldsystems.org/index.php/IDS_OpenIdEngine). This dataset can be used by studies dealing with, among other interests, Antarctic and/or crinoid diversity (species richness, distribution patterns), biogeography or habitat / ecological niche modeling. This dataset is accessible through the GBIF network at http://ipt.biodiversity.aq/resource.do?r=proke. |
format |
Other/Unknown Material |
author |
Hemery,Lenaig Améziane,Nadia Eleaume,Marc |
author_facet |
Hemery,Lenaig Améziane,Nadia Eleaume,Marc |
author_sort |
Hemery,Lenaig |
title |
Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
title_short |
Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
title_full |
Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
title_fullStr |
Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
title_full_unstemmed |
Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea) |
title_sort |
circumpolar dataset of sequenced specimens of promachocrinus kerguelensis (echinodermata, crinoidea) |
publisher |
Pensoft Publishers |
publishDate |
2013 |
url |
https://doi.org/10.3897/zookeys.315.5673 https://zookeys.pensoft.net/article/3326/ |
long_lat |
ENVELOPE(93.500,93.500,-66.000,-66.000) ENVELOPE(140.000,140.000,-66.667,-66.667) |
geographic |
Amundsen Sea Antarctic Antarctic Peninsula Bransfield Strait Davis Sea Dumont d’Urville Kerguelen Ross Sea Southern Ocean The Antarctic Weddell Weddell Sea |
geographic_facet |
Amundsen Sea Antarctic Antarctic Peninsula Bransfield Strait Davis Sea Dumont d’Urville Kerguelen Ross Sea Southern Ocean The Antarctic Weddell Weddell Sea |
genre |
Amundsen Sea Antarc* Antarctic Antarctic Peninsula Antarctica Bransfield Strait Davis Sea D’Urville Sea Ross Sea Southern Ocean Weddell Sea |
genre_facet |
Amundsen Sea Antarc* Antarctic Antarctic Peninsula Antarctica Bransfield Strait Davis Sea D’Urville Sea Ross Sea Southern Ocean Weddell Sea |
op_source |
ZooKeys 315: 55-64 |
op_relation |
info:eu-repo/semantics/altIdentifier/eissn/1313-2970 info:eu-repo/semantics/altIdentifier/pissn/1313-2989 |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.3897/zookeys.315.5673 |
container_title |
ZooKeys |
container_volume |
315 |
container_start_page |
55 |
op_container_end_page |
64 |
_version_ |
1766378173827645440 |