Bog bacterial community: data from north-western Russia

Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of...

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Published in:Biodiversity Data Journal
Main Authors: Zubov,Ivan, Shpanov,Dmitrij, Ponomareva,Tamara, Aksenov,Andrey
Format: Article in Journal/Newspaper
Language:English
Published: Pensoft Publishers 2024
Subjects:
bog
Online Access:https://doi.org/10.3897/BDJ.12.e118448
https://bdj.pensoft.net/article/118448/
https://bdj.pensoft.net/article/118448/download/pdf/
id ftpensoft:10.3897/BDJ.12.e118448
record_format openpolar
spelling ftpensoft:10.3897/BDJ.12.e118448 2024-09-15T18:25:09+00:00 Bog bacterial community: data from north-western Russia Zubov,Ivan Shpanov,Dmitrij Ponomareva,Tamara Aksenov,Andrey 2024 text/html https://doi.org/10.3897/BDJ.12.e118448 https://bdj.pensoft.net/article/118448/ https://bdj.pensoft.net/article/118448/download/pdf/ en eng Pensoft Publishers info:eu-repo/semantics/altIdentifier/eissn/1314-2828 info:eu-repo/semantics/altIdentifier/pissn/1314-2836 info:eu-repo/semantics/openAccess CC BY 4.0 Biodiversity Data Journal 12: e118448 barcode amplicon sequencing 16S rRNA gene prokaryote high-moor peat bog biodiversity north-western Russia Research Article 2024 ftpensoft https://doi.org/10.3897/BDJ.12.e118448 2024-08-26T14:06:31Z Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of the carbon cycle in wetland systems, while the violation of their fragile balance due to climate change increases the rate of mineralisation of organic matter and releases large amounts of carbon to the atmosphere. The biochemical processes occurring in a peat deposit determine the intensity of the destruction of organic matter and gas exchange. However, the microbial communities of the boreal ombrotrophic bogs, regulating those processes, are poorly studied.Hence, a study of the prokaryote communities of the peat deposits of the southern White Sea coastal ombrotrophic bogs (mostly spread in north-western Russia) was carried out. The taxonomic composition of archaea and bacteria sampled from the deposit’s depth of 0–310 cm was studied using high-throughput sequencing of V4 sites of 16S rRNA gene by Illumina technology. As a result, 105 species belonging to 19 phylums were identified. The dominant specific phyla were Pseudomonadota, Acidobacteriota and Verrucomicrobiota, the non-specific phylum being Desulfobacterota. Various groups of methanogenic, methylotrophic and nitrogen-fixing microorganisms were identified. Shannon's biodiversity ranged from 3.5 to 4.6 and ChaO1 - from 232 to 351, decreasing within the depth. Article in Journal/Newspaper North-Western Russia White Sea Pensoft Publishers Biodiversity Data Journal 12
institution Open Polar
collection Pensoft Publishers
op_collection_id ftpensoft
language English
topic barcode amplicon sequencing
16S rRNA gene
prokaryote
high-moor peat
bog
biodiversity
north-western Russia
spellingShingle barcode amplicon sequencing
16S rRNA gene
prokaryote
high-moor peat
bog
biodiversity
north-western Russia
Zubov,Ivan
Shpanov,Dmitrij
Ponomareva,Tamara
Aksenov,Andrey
Bog bacterial community: data from north-western Russia
topic_facet barcode amplicon sequencing
16S rRNA gene
prokaryote
high-moor peat
bog
biodiversity
north-western Russia
description Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of the carbon cycle in wetland systems, while the violation of their fragile balance due to climate change increases the rate of mineralisation of organic matter and releases large amounts of carbon to the atmosphere. The biochemical processes occurring in a peat deposit determine the intensity of the destruction of organic matter and gas exchange. However, the microbial communities of the boreal ombrotrophic bogs, regulating those processes, are poorly studied.Hence, a study of the prokaryote communities of the peat deposits of the southern White Sea coastal ombrotrophic bogs (mostly spread in north-western Russia) was carried out. The taxonomic composition of archaea and bacteria sampled from the deposit’s depth of 0–310 cm was studied using high-throughput sequencing of V4 sites of 16S rRNA gene by Illumina technology. As a result, 105 species belonging to 19 phylums were identified. The dominant specific phyla were Pseudomonadota, Acidobacteriota and Verrucomicrobiota, the non-specific phylum being Desulfobacterota. Various groups of methanogenic, methylotrophic and nitrogen-fixing microorganisms were identified. Shannon's biodiversity ranged from 3.5 to 4.6 and ChaO1 - from 232 to 351, decreasing within the depth.
format Article in Journal/Newspaper
author Zubov,Ivan
Shpanov,Dmitrij
Ponomareva,Tamara
Aksenov,Andrey
author_facet Zubov,Ivan
Shpanov,Dmitrij
Ponomareva,Tamara
Aksenov,Andrey
author_sort Zubov,Ivan
title Bog bacterial community: data from north-western Russia
title_short Bog bacterial community: data from north-western Russia
title_full Bog bacterial community: data from north-western Russia
title_fullStr Bog bacterial community: data from north-western Russia
title_full_unstemmed Bog bacterial community: data from north-western Russia
title_sort bog bacterial community: data from north-western russia
publisher Pensoft Publishers
publishDate 2024
url https://doi.org/10.3897/BDJ.12.e118448
https://bdj.pensoft.net/article/118448/
https://bdj.pensoft.net/article/118448/download/pdf/
genre North-Western Russia
White Sea
genre_facet North-Western Russia
White Sea
op_source Biodiversity Data Journal 12: e118448
op_relation info:eu-repo/semantics/altIdentifier/eissn/1314-2828
info:eu-repo/semantics/altIdentifier/pissn/1314-2836
op_rights info:eu-repo/semantics/openAccess
CC BY 4.0
op_doi https://doi.org/10.3897/BDJ.12.e118448
container_title Biodiversity Data Journal
container_volume 12
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