Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May

Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also beca...

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Main Authors: Heyen, Simone, Töpker, Verena, Kopke, Bernd, Cakić, Nevenka, Hüppe, Lukas, Meyer, Bettina, Wilkes, Heinz
Format: Dataset
Language:English
Published: PANGAEA
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.973184
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author Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
author_facet Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
author_sort Heyen, Simone
collection PANGAEA - Data Publisher for Earth & Environmental Science
description Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Isoprenoid quinones from the digestive system of Antarctic krill, Euphausia superba, were measured after liquid-liquid extraction of bead-beater extracts. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of quinones was based on characteristic fragments in MS2 experiments in positive electrospray ionization mode.
format Dataset
genre Antarc*
Antarctic
Antarctic Krill
Antarctic Peninsula
Bransfield Strait
Euphausia superba
South Orkney Islands
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Krill
Antarctic Peninsula
Bransfield Strait
Euphausia superba
South Orkney Islands
Southern Ocean
geographic Antarctic
Antarctic Peninsula
Bransfield Strait
South Orkney Islands
Southern Ocean
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
Bransfield Strait
South Orkney Islands
Southern Ocean
The Antarctic
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973184
institution Open Polar
language English
long_lat ENVELOPE(-45.500,-45.500,-60.583,-60.583)
ENVELOPE(-57.478730,-46.178760,-60.100880,-63.008650)
op_collection_id ftpangaea
op_coverage MEDIAN LATITUDE: -61.428652 * MEDIAN LONGITUDE: -51.820825 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.100880 * EAST-BOUND LONGITUDE: -46.178760 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m
op_relation https://doi.pangaea.de/10.1594/PANGAEA.973179
https://doi.pangaea.de/10.1594/PANGAEA.973184
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends)
Access constraints: access rights needed
info:eu-repo/semantics/restrictedAccess
publisher PANGAEA
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973184 2025-05-18T13:55:34+00:00 Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz MEDIAN LATITUDE: -61.428652 * MEDIAN LONGITUDE: -51.820825 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.100880 * EAST-BOUND LONGITUDE: -46.178760 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m text/tab-separated-values, 1056 data points https://doi.pangaea.de/10.1594/PANGAEA.973184 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.973179 https://doi.pangaea.de/10.1594/PANGAEA.973184 CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends) Access constraints: access rights needed info:eu-repo/semantics/restrictedAccess amino acids ANT_END_KiGuMi_17 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait B vitamins Coenzyme A thioesters Continous krill pumping system Date/Time of event DEPTH water Elevation of event Euphausia superba Event label Latitude of event Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap Location of event Longitude of event Menaquinone-11:11 Menaquinone-12:12 Menaquinone-7:7 Menaquinone-8:7 Menaquinone-8:8 Organ Plastoquinone-9:8 Respiratory quinones Sample ID Sex Southern Ocean South Orkney Islands Ubiquinone-10:10 Ubiquinone-10:9 Ubiquinone-6:5 Ubiquinone-7:6 Ubiquinone-7:7 Ubiquinone-8:7 Ubiquinone-8:8 Ubiquinone-9:9 dataset ftpangaea 2025-04-24T14:25:16Z Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Isoprenoid quinones from the digestive system of Antarctic krill, Euphausia superba, were measured after liquid-liquid extraction of bead-beater extracts. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of quinones was based on characteristic fragments in MS2 experiments in positive electrospray ionization mode. Dataset Antarc* Antarctic Antarctic Krill Antarctic Peninsula Bransfield Strait Euphausia superba South Orkney Islands Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science Antarctic Antarctic Peninsula Bransfield Strait South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) Southern Ocean The Antarctic ENVELOPE(-57.478730,-46.178760,-60.100880,-63.008650)
spellingShingle amino acids
ANT_END_KiGuMi_17
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
B vitamins
Coenzyme A thioesters
Continous krill pumping system
Date/Time of event
DEPTH
water
Elevation of event
Euphausia superba
Event label
Latitude of event
Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap
Location of event
Longitude of event
Menaquinone-11:11
Menaquinone-12:12
Menaquinone-7:7
Menaquinone-8:7
Menaquinone-8:8
Organ
Plastoquinone-9:8
Respiratory quinones
Sample ID
Sex
Southern Ocean
South Orkney Islands
Ubiquinone-10:10
Ubiquinone-10:9
Ubiquinone-6:5
Ubiquinone-7:6
Ubiquinone-7:7
Ubiquinone-8:7
Ubiquinone-8:8
Ubiquinone-9:9
Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_full Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_fullStr Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_full_unstemmed Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_short Isoprenoid quinones in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_sort isoprenoid quinones in the digestive system of antarctic krill, euphausia superba, sampled in january, march and may
topic amino acids
ANT_END_KiGuMi_17
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
B vitamins
Coenzyme A thioesters
Continous krill pumping system
Date/Time of event
DEPTH
water
Elevation of event
Euphausia superba
Event label
Latitude of event
Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap
Location of event
Longitude of event
Menaquinone-11:11
Menaquinone-12:12
Menaquinone-7:7
Menaquinone-8:7
Menaquinone-8:8
Organ
Plastoquinone-9:8
Respiratory quinones
Sample ID
Sex
Southern Ocean
South Orkney Islands
Ubiquinone-10:10
Ubiquinone-10:9
Ubiquinone-6:5
Ubiquinone-7:6
Ubiquinone-7:7
Ubiquinone-8:7
Ubiquinone-8:8
Ubiquinone-9:9
topic_facet amino acids
ANT_END_KiGuMi_17
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
B vitamins
Coenzyme A thioesters
Continous krill pumping system
Date/Time of event
DEPTH
water
Elevation of event
Euphausia superba
Event label
Latitude of event
Liquid chromatography-high resolution mass spectrometry (LC-HRMS) with Orbitrap
Location of event
Longitude of event
Menaquinone-11:11
Menaquinone-12:12
Menaquinone-7:7
Menaquinone-8:7
Menaquinone-8:8
Organ
Plastoquinone-9:8
Respiratory quinones
Sample ID
Sex
Southern Ocean
South Orkney Islands
Ubiquinone-10:10
Ubiquinone-10:9
Ubiquinone-6:5
Ubiquinone-7:6
Ubiquinone-7:7
Ubiquinone-8:7
Ubiquinone-8:8
Ubiquinone-9:9
url https://doi.pangaea.de/10.1594/PANGAEA.973184