Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also beca...
Main Authors: | , , , , , , |
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Format: | Dataset |
Language: | English |
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PANGAEA
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.973180 |
_version_ | 1832479930276904960 |
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author | Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz |
author_facet | Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz |
author_sort | Heyen, Simone |
collection | PANGAEA - Data Publisher for Earth & Environmental Science |
description | Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications. |
format | Dataset |
genre | Antarc* Antarctic Antarctic Krill Antarctic Peninsula Bransfield Strait Euphausia superba South Orkney Islands Southern Ocean |
genre_facet | Antarc* Antarctic Antarctic Krill Antarctic Peninsula Bransfield Strait Euphausia superba South Orkney Islands Southern Ocean |
geographic | Antarctic Southern Ocean The Antarctic Antarctic Peninsula Bransfield Strait South Orkney Islands |
geographic_facet | Antarctic Southern Ocean The Antarctic Antarctic Peninsula Bransfield Strait South Orkney Islands |
id | ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973180 |
institution | Open Polar |
language | English |
long_lat | ENVELOPE(-45.500,-45.500,-60.583,-60.583) ENVELOPE(-57.478730,-46.200000,-60.147840,-63.008650) |
op_collection_id | ftpangaea |
op_coverage | MEDIAN LATITUDE: -61.453432 * MEDIAN LONGITUDE: -51.826135 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.147840 * EAST-BOUND LONGITUDE: -46.200000 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m |
op_relation | https://doi.pangaea.de/10.1594/PANGAEA.973179 https://doi.pangaea.de/10.1594/PANGAEA.973180 |
op_rights | CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends) Access constraints: access rights needed info:eu-repo/semantics/restrictedAccess |
publisher | PANGAEA |
record_format | openpolar |
spelling | ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973180 2025-05-18T13:55:26+00:00 Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz MEDIAN LATITUDE: -61.453432 * MEDIAN LONGITUDE: -51.826135 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.147840 * EAST-BOUND LONGITUDE: -46.200000 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m text/tab-separated-values, 6381 data points https://doi.pangaea.de/10.1594/PANGAEA.973180 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.973179 https://doi.pangaea.de/10.1594/PANGAEA.973180 CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends) Access constraints: access rights needed info:eu-repo/semantics/restrictedAccess 2-Hydroxybutyryl-CoA 2-Hydroxyglutaryl-CoA 2-Methyl-2-butenoyl-CoA 2-Methyl-2-hexenoyl-CoA 2-Methylbutyryl-CoA 2-Methylhexanoyl-CoA 2-Methylsuccinyl-CoA 3-Hydroxy-2-methylbutyryl-CoA 3-Hydroxy-3-methyglutaryl-CoA 3-Hydroxy-3-methylbutyryl-CoA 3-Hydroxybutyryl-CoA 3-Hydroxyhexanoyl-CoA 3-Hydroxypentanoyl-CoA 3-Hydroxypropionyl-CoA 3-Methylsuccinyl-CoA 3-Oxohexanoyl-CoA 5-Methylhexanoyl-CoA Acetoacetyl-CoA Acetyl-CoA amino acids ANT_END_KiGuMi_18 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait Butenoyl-CoA Butyryl-CoA B vitamins C29H44N7O18P3S Coenzyme A thioesters Continous krill pumping system Crotonyl-CoA Date/Time of event Decanedioyl-CoA DEPTH water Dihydroxyhexanoyl-CoA Elevation of event Ethylmalonyl-CoA Euphausia superba Event label Geranyl-CoA Heptanoyl-CoA Hexanoyl-CoA Hexenoyl-CoA dataset ftpangaea 2025-04-24T14:25:16Z Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications. Dataset Antarc* Antarctic Antarctic Krill Antarctic Peninsula Bransfield Strait Euphausia superba South Orkney Islands Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science Antarctic Southern Ocean The Antarctic Antarctic Peninsula Bransfield Strait South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) ENVELOPE(-57.478730,-46.200000,-60.147840,-63.008650) |
spellingShingle | 2-Hydroxybutyryl-CoA 2-Hydroxyglutaryl-CoA 2-Methyl-2-butenoyl-CoA 2-Methyl-2-hexenoyl-CoA 2-Methylbutyryl-CoA 2-Methylhexanoyl-CoA 2-Methylsuccinyl-CoA 3-Hydroxy-2-methylbutyryl-CoA 3-Hydroxy-3-methyglutaryl-CoA 3-Hydroxy-3-methylbutyryl-CoA 3-Hydroxybutyryl-CoA 3-Hydroxyhexanoyl-CoA 3-Hydroxypentanoyl-CoA 3-Hydroxypropionyl-CoA 3-Methylsuccinyl-CoA 3-Oxohexanoyl-CoA 5-Methylhexanoyl-CoA Acetoacetyl-CoA Acetyl-CoA amino acids ANT_END_KiGuMi_18 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait Butenoyl-CoA Butyryl-CoA B vitamins C29H44N7O18P3S Coenzyme A thioesters Continous krill pumping system Crotonyl-CoA Date/Time of event Decanedioyl-CoA DEPTH water Dihydroxyhexanoyl-CoA Elevation of event Ethylmalonyl-CoA Euphausia superba Event label Geranyl-CoA Heptanoyl-CoA Hexanoyl-CoA Hexenoyl-CoA Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title_full | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title_fullStr | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title_full_unstemmed | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title_short | Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May |
title_sort | coenzyme a thioester in the digestive system of antarctic krill, euphausia superba, sampled in january, march and may |
topic | 2-Hydroxybutyryl-CoA 2-Hydroxyglutaryl-CoA 2-Methyl-2-butenoyl-CoA 2-Methyl-2-hexenoyl-CoA 2-Methylbutyryl-CoA 2-Methylhexanoyl-CoA 2-Methylsuccinyl-CoA 3-Hydroxy-2-methylbutyryl-CoA 3-Hydroxy-3-methyglutaryl-CoA 3-Hydroxy-3-methylbutyryl-CoA 3-Hydroxybutyryl-CoA 3-Hydroxyhexanoyl-CoA 3-Hydroxypentanoyl-CoA 3-Hydroxypropionyl-CoA 3-Methylsuccinyl-CoA 3-Oxohexanoyl-CoA 5-Methylhexanoyl-CoA Acetoacetyl-CoA Acetyl-CoA amino acids ANT_END_KiGuMi_18 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait Butenoyl-CoA Butyryl-CoA B vitamins C29H44N7O18P3S Coenzyme A thioesters Continous krill pumping system Crotonyl-CoA Date/Time of event Decanedioyl-CoA DEPTH water Dihydroxyhexanoyl-CoA Elevation of event Ethylmalonyl-CoA Euphausia superba Event label Geranyl-CoA Heptanoyl-CoA Hexanoyl-CoA Hexenoyl-CoA |
topic_facet | 2-Hydroxybutyryl-CoA 2-Hydroxyglutaryl-CoA 2-Methyl-2-butenoyl-CoA 2-Methyl-2-hexenoyl-CoA 2-Methylbutyryl-CoA 2-Methylhexanoyl-CoA 2-Methylsuccinyl-CoA 3-Hydroxy-2-methylbutyryl-CoA 3-Hydroxy-3-methyglutaryl-CoA 3-Hydroxy-3-methylbutyryl-CoA 3-Hydroxybutyryl-CoA 3-Hydroxyhexanoyl-CoA 3-Hydroxypentanoyl-CoA 3-Hydroxypropionyl-CoA 3-Methylsuccinyl-CoA 3-Oxohexanoyl-CoA 5-Methylhexanoyl-CoA Acetoacetyl-CoA Acetyl-CoA amino acids ANT_END_KiGuMi_18 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait Butenoyl-CoA Butyryl-CoA B vitamins C29H44N7O18P3S Coenzyme A thioesters Continous krill pumping system Crotonyl-CoA Date/Time of event Decanedioyl-CoA DEPTH water Dihydroxyhexanoyl-CoA Elevation of event Ethylmalonyl-CoA Euphausia superba Event label Geranyl-CoA Heptanoyl-CoA Hexanoyl-CoA Hexenoyl-CoA |
url | https://doi.pangaea.de/10.1594/PANGAEA.973180 |