Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May

Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also beca...

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Main Authors: Heyen, Simone, Töpker, Verena, Kopke, Bernd, Cakić, Nevenka, Hüppe, Lukas, Meyer, Bettina, Wilkes, Heinz
Format: Dataset
Language:English
Published: PANGAEA
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.973180
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author Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
author_facet Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
author_sort Heyen, Simone
collection PANGAEA - Data Publisher for Earth & Environmental Science
description Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications.
format Dataset
genre Antarc*
Antarctic
Antarctic Krill
Antarctic Peninsula
Bransfield Strait
Euphausia superba
South Orkney Islands
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Krill
Antarctic Peninsula
Bransfield Strait
Euphausia superba
South Orkney Islands
Southern Ocean
geographic Antarctic
Southern Ocean
The Antarctic
Antarctic Peninsula
Bransfield Strait
South Orkney Islands
geographic_facet Antarctic
Southern Ocean
The Antarctic
Antarctic Peninsula
Bransfield Strait
South Orkney Islands
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973180
institution Open Polar
language English
long_lat ENVELOPE(-45.500,-45.500,-60.583,-60.583)
ENVELOPE(-57.478730,-46.200000,-60.147840,-63.008650)
op_collection_id ftpangaea
op_coverage MEDIAN LATITUDE: -61.453432 * MEDIAN LONGITUDE: -51.826135 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.147840 * EAST-BOUND LONGITUDE: -46.200000 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m
op_relation https://doi.pangaea.de/10.1594/PANGAEA.973179
https://doi.pangaea.de/10.1594/PANGAEA.973180
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends)
Access constraints: access rights needed
info:eu-repo/semantics/restrictedAccess
publisher PANGAEA
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.973180 2025-05-18T13:55:26+00:00 Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May Heyen, Simone Töpker, Verena Kopke, Bernd Cakić, Nevenka Hüppe, Lukas Meyer, Bettina Wilkes, Heinz MEDIAN LATITUDE: -61.453432 * MEDIAN LONGITUDE: -51.826135 * SOUTH-BOUND LATITUDE: -63.008650 * WEST-BOUND LONGITUDE: -57.478730 * NORTH-BOUND LATITUDE: -60.147840 * EAST-BOUND LONGITUDE: -46.200000 * DATE/TIME START: 2021-05-15T15:26:00 * DATE/TIME END: 2022-03-08T14:20:00 * MINIMUM DEPTH, water: 34.9 m * MAXIMUM DEPTH, water: 141.7 m text/tab-separated-values, 6381 data points https://doi.pangaea.de/10.1594/PANGAEA.973180 en eng PANGAEA https://doi.pangaea.de/10.1594/PANGAEA.973179 https://doi.pangaea.de/10.1594/PANGAEA.973180 CC-BY-4.0: Creative Commons Attribution 4.0 International (License comes into effect after moratorium ends) Access constraints: access rights needed info:eu-repo/semantics/restrictedAccess 2-Hydroxybutyryl-CoA 2-Hydroxyglutaryl-CoA 2-Methyl-2-butenoyl-CoA 2-Methyl-2-hexenoyl-CoA 2-Methylbutyryl-CoA 2-Methylhexanoyl-CoA 2-Methylsuccinyl-CoA 3-Hydroxy-2-methylbutyryl-CoA 3-Hydroxy-3-methyglutaryl-CoA 3-Hydroxy-3-methylbutyryl-CoA 3-Hydroxybutyryl-CoA 3-Hydroxyhexanoyl-CoA 3-Hydroxypentanoyl-CoA 3-Hydroxypropionyl-CoA 3-Methylsuccinyl-CoA 3-Oxohexanoyl-CoA 5-Methylhexanoyl-CoA Acetoacetyl-CoA Acetyl-CoA amino acids ANT_END_KiGuMi_18 ANT_END_KiGuMi_21 ANT_END_KiGuMi_3 ANT_END_KiGuMi_7 ANT_END_LEG_3 ANT_END_LEG2 Antarctic Endurance Antarctic krill Antarctic Peninsula Bransfield Strait Butenoyl-CoA Butyryl-CoA B vitamins C29H44N7O18P3S Coenzyme A thioesters Continous krill pumping system Crotonyl-CoA Date/Time of event Decanedioyl-CoA DEPTH water Dihydroxyhexanoyl-CoA Elevation of event Ethylmalonyl-CoA Euphausia superba Event label Geranyl-CoA Heptanoyl-CoA Hexanoyl-CoA Hexenoyl-CoA dataset ftpangaea 2025-04-24T14:25:16Z Antarctic krill, Euphausia superba, is a key species in the Southern Ocean with an immense biomass. Ongoing climate change affects their food availability, habitat and survivability. Therefore, markers documenting changes in this species are important to monitor and discover future issues, also because krill-derived products are manufactured for human consumption. Several studies have focused on the composition of krill-derived lipids. However, they may be a potential in other metabolites to serve as tracers identifying shifts in the Antarctic environment. Krill was caught with a continuous krill pumping system in May of 2021 in the Bransfield Strait and in January and March of 2022 at the South Orkney Islands aboard the commercial krill fishing vessel Antarctic Endurance. The stomach, digestive gland and hind gut were dissected and analysed individually. Samples were initially extracted by bead-beating, with individual subsequent extraction steps adjusted for the different metabolic classes. Coenzyme A thioesters from the digestive system of Antarctic krill, Euphausia superba, were measured in bead-beater extracts resolved in water and filtered. Measurement was performed with liquid chromatography - high-resolution mass spectrometry on an Orbitrap mass spectrometer. Identification of coenzyme A thioesters was based on standards and characteristic fragments in MS2 experiments in positive electrospray ionization mode as well as on the high-resolution masses acquired. Using the high-resolution masses, sum formulas were assigned. The second row displays CoAs identify with standards (bold) or suggestions for possible CoAs, oftentimes neglecting branches or other possible modifications. Dataset Antarc* Antarctic Antarctic Krill Antarctic Peninsula Bransfield Strait Euphausia superba South Orkney Islands Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science Antarctic Southern Ocean The Antarctic Antarctic Peninsula Bransfield Strait South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) ENVELOPE(-57.478730,-46.200000,-60.147840,-63.008650)
spellingShingle 2-Hydroxybutyryl-CoA
2-Hydroxyglutaryl-CoA
2-Methyl-2-butenoyl-CoA
2-Methyl-2-hexenoyl-CoA
2-Methylbutyryl-CoA
2-Methylhexanoyl-CoA
2-Methylsuccinyl-CoA
3-Hydroxy-2-methylbutyryl-CoA
3-Hydroxy-3-methyglutaryl-CoA
3-Hydroxy-3-methylbutyryl-CoA
3-Hydroxybutyryl-CoA
3-Hydroxyhexanoyl-CoA
3-Hydroxypentanoyl-CoA
3-Hydroxypropionyl-CoA
3-Methylsuccinyl-CoA
3-Oxohexanoyl-CoA
5-Methylhexanoyl-CoA
Acetoacetyl-CoA
Acetyl-CoA
amino acids
ANT_END_KiGuMi_18
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
Butenoyl-CoA
Butyryl-CoA
B vitamins
C29H44N7O18P3S
Coenzyme A thioesters
Continous krill pumping system
Crotonyl-CoA
Date/Time of event
Decanedioyl-CoA
DEPTH
water
Dihydroxyhexanoyl-CoA
Elevation of event
Ethylmalonyl-CoA
Euphausia superba
Event label
Geranyl-CoA
Heptanoyl-CoA
Hexanoyl-CoA
Hexenoyl-CoA
Heyen, Simone
Töpker, Verena
Kopke, Bernd
Cakić, Nevenka
Hüppe, Lukas
Meyer, Bettina
Wilkes, Heinz
Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_full Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_fullStr Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_full_unstemmed Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_short Coenzyme A thioester in the digestive system of Antarctic krill, Euphausia superba, sampled in January, March and May
title_sort coenzyme a thioester in the digestive system of antarctic krill, euphausia superba, sampled in january, march and may
topic 2-Hydroxybutyryl-CoA
2-Hydroxyglutaryl-CoA
2-Methyl-2-butenoyl-CoA
2-Methyl-2-hexenoyl-CoA
2-Methylbutyryl-CoA
2-Methylhexanoyl-CoA
2-Methylsuccinyl-CoA
3-Hydroxy-2-methylbutyryl-CoA
3-Hydroxy-3-methyglutaryl-CoA
3-Hydroxy-3-methylbutyryl-CoA
3-Hydroxybutyryl-CoA
3-Hydroxyhexanoyl-CoA
3-Hydroxypentanoyl-CoA
3-Hydroxypropionyl-CoA
3-Methylsuccinyl-CoA
3-Oxohexanoyl-CoA
5-Methylhexanoyl-CoA
Acetoacetyl-CoA
Acetyl-CoA
amino acids
ANT_END_KiGuMi_18
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
Butenoyl-CoA
Butyryl-CoA
B vitamins
C29H44N7O18P3S
Coenzyme A thioesters
Continous krill pumping system
Crotonyl-CoA
Date/Time of event
Decanedioyl-CoA
DEPTH
water
Dihydroxyhexanoyl-CoA
Elevation of event
Ethylmalonyl-CoA
Euphausia superba
Event label
Geranyl-CoA
Heptanoyl-CoA
Hexanoyl-CoA
Hexenoyl-CoA
topic_facet 2-Hydroxybutyryl-CoA
2-Hydroxyglutaryl-CoA
2-Methyl-2-butenoyl-CoA
2-Methyl-2-hexenoyl-CoA
2-Methylbutyryl-CoA
2-Methylhexanoyl-CoA
2-Methylsuccinyl-CoA
3-Hydroxy-2-methylbutyryl-CoA
3-Hydroxy-3-methyglutaryl-CoA
3-Hydroxy-3-methylbutyryl-CoA
3-Hydroxybutyryl-CoA
3-Hydroxyhexanoyl-CoA
3-Hydroxypentanoyl-CoA
3-Hydroxypropionyl-CoA
3-Methylsuccinyl-CoA
3-Oxohexanoyl-CoA
5-Methylhexanoyl-CoA
Acetoacetyl-CoA
Acetyl-CoA
amino acids
ANT_END_KiGuMi_18
ANT_END_KiGuMi_21
ANT_END_KiGuMi_3
ANT_END_KiGuMi_7
ANT_END_LEG_3
ANT_END_LEG2
Antarctic Endurance
Antarctic krill
Antarctic Peninsula
Bransfield Strait
Butenoyl-CoA
Butyryl-CoA
B vitamins
C29H44N7O18P3S
Coenzyme A thioesters
Continous krill pumping system
Crotonyl-CoA
Date/Time of event
Decanedioyl-CoA
DEPTH
water
Dihydroxyhexanoyl-CoA
Elevation of event
Ethylmalonyl-CoA
Euphausia superba
Event label
Geranyl-CoA
Heptanoyl-CoA
Hexanoyl-CoA
Hexenoyl-CoA
url https://doi.pangaea.de/10.1594/PANGAEA.973180