Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus
Calcification is vital to marine organisms that produce calcium carbonate shells and skeletons. However, how calcification is impacted by ongoing environmental changes, including ocean acidification, remains incompletely understood due to complex relationships among the carbonate system variables hy...
Main Authors: | , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2024
|
Subjects: | |
Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.968916 |
id |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.968916 |
---|---|
record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Alkalinity total Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Byssal thread production rate Calcification/Dissolution Calcification rate of calcium carbonate Calcite saturation state Calcium Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Carmet_Beach Change in alkalinity Change in ammonia concentration Coast and continental shelf Condition index Correction Date/Time local Date/time start Dissolution rate Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Identification Incubation duration Laboratory experiment Local Time Mass Mollusca Mytilus californianus North Pacific OA-ICC Ocean Acidification International Coordination Centre Oxygen Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Ratio Salinity Shell |
spellingShingle |
Alkalinity total Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Byssal thread production rate Calcification/Dissolution Calcification rate of calcium carbonate Calcite saturation state Calcium Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Carmet_Beach Change in alkalinity Change in ammonia concentration Coast and continental shelf Condition index Correction Date/Time local Date/time start Dissolution rate Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Identification Incubation duration Laboratory experiment Local Time Mass Mollusca Mytilus californianus North Pacific OA-ICC Ocean Acidification International Coordination Centre Oxygen Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Ratio Salinity Shell Ninokawa, Aaron Saley, Alisha M Shalchi, Roya Gaylord, B Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
topic_facet |
Alkalinity total Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Byssal thread production rate Calcification/Dissolution Calcification rate of calcium carbonate Calcite saturation state Calcium Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Carmet_Beach Change in alkalinity Change in ammonia concentration Coast and continental shelf Condition index Correction Date/Time local Date/time start Dissolution rate Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Identification Incubation duration Laboratory experiment Local Time Mass Mollusca Mytilus californianus North Pacific OA-ICC Ocean Acidification International Coordination Centre Oxygen Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Ratio Salinity Shell |
description |
Calcification is vital to marine organisms that produce calcium carbonate shells and skeletons. However, how calcification is impacted by ongoing environmental changes, including ocean acidification, remains incompletely understood due to complex relationships among the carbonate system variables hypothesized to drive calcification. Here, we experimentally decouple these drivers in an exploration of shell formation in adult marine mussels, Mytilus californianus. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from BCO-DMO (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-06-07. |
format |
Dataset |
author |
Ninokawa, Aaron Saley, Alisha M Shalchi, Roya Gaylord, B |
author_facet |
Ninokawa, Aaron Saley, Alisha M Shalchi, Roya Gaylord, B |
author_sort |
Ninokawa, Aaron |
title |
Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
title_short |
Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
title_full |
Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
title_fullStr |
Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
title_full_unstemmed |
Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus |
title_sort |
seawater carbonate chemistry and shell formation in adult marine mussels, mytilus californianus |
publisher |
PANGAEA |
publishDate |
2024 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.968916 |
op_coverage |
LATITUDE: 38.371400 * LONGITUDE: -123.076000 * DATE/TIME START: 2020-01-01T00:00:00 * DATE/TIME END: 2022-04-30T00:00:00 |
long_lat |
ENVELOPE(-123.076000,-123.076000,38.371400,38.371400) |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
Ninokawa, Aaron; Saley, Alisha M; Shalchi, Roya; Gaylord, B (2024): Multiple carbonate system parameters independently govern shell formation in a marine mussel. Communications Earth & Environment, 5(1), 273, https://doi.org/10.1038/s43247-024-01440-5 Gaylord, B (2024): Allometric scaling of calcification data for Mytilus californianus from 2021-2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925689 Gaylord, B (2024): Control incubation data during Mytilus californianus calcification experiments from 2020 to 2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925714 Gaylord, B (2024): Incubation data for Mytilus californianus calcification from January to April 2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925598 Gaylord, B (2024): Shell dissolution data for Mytilus californianus from March to July 2020 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925664 Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.968916 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.5194/essd-2-167-2010 |
_version_ |
1802648519198113792 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.968916 2024-06-23T07:55:48+00:00 Seawater carbonate chemistry and shell formation in adult marine mussels, Mytilus californianus Ninokawa, Aaron Saley, Alisha M Shalchi, Roya Gaylord, B LATITUDE: 38.371400 * LONGITUDE: -123.076000 * DATE/TIME START: 2020-01-01T00:00:00 * DATE/TIME END: 2022-04-30T00:00:00 2024 text/tab-separated-values, 18307 data points https://doi.pangaea.de/10.1594/PANGAEA.968916 en eng PANGAEA Ninokawa, Aaron; Saley, Alisha M; Shalchi, Roya; Gaylord, B (2024): Multiple carbonate system parameters independently govern shell formation in a marine mussel. Communications Earth & Environment, 5(1), 273, https://doi.org/10.1038/s43247-024-01440-5 Gaylord, B (2024): Allometric scaling of calcification data for Mytilus californianus from 2021-2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925689 Gaylord, B (2024): Control incubation data during Mytilus californianus calcification experiments from 2020 to 2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925714 Gaylord, B (2024): Incubation data for Mytilus californianus calcification from January to April 2022 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925598 Gaylord, B (2024): Shell dissolution data for Mytilus californianus from March to July 2020 (OA decoupling project). (Version 1) Version Date 2024-05-06. Biological and Chemical Oceanography Data Management Office (BCO-DMO), https://www.bco-dmo.org/dataset/925664 Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.968916 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Byssal thread production rate Calcification/Dissolution Calcification rate of calcium carbonate Calcite saturation state Calcium Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Carmet_Beach Change in alkalinity Change in ammonia concentration Coast and continental shelf Condition index Correction Date/Time local Date/time start Dissolution rate Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Identification Incubation duration Laboratory experiment Local Time Mass Mollusca Mytilus californianus North Pacific OA-ICC Ocean Acidification International Coordination Centre Oxygen Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Ratio Salinity Shell Dataset 2024 ftpangaea https://doi.org/10.5194/essd-2-167-2010 2024-06-12T14:17:12Z Calcification is vital to marine organisms that produce calcium carbonate shells and skeletons. However, how calcification is impacted by ongoing environmental changes, including ocean acidification, remains incompletely understood due to complex relationships among the carbonate system variables hypothesized to drive calcification. Here, we experimentally decouple these drivers in an exploration of shell formation in adult marine mussels, Mytilus californianus. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from BCO-DMO (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-06-07. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific ENVELOPE(-123.076000,-123.076000,38.371400,38.371400) |