Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae

We measured N and O isotope effects during nitrate assimilation and physiological states of the marine diatom Thalassiosira weissflogii and Synechococcus under different pH (8.1 or 7.8) and pCO2 (400 or 800 μatm) conditions. This dataset is included in the OA-ICC data compilation maintained in the f...

Full description

Bibliographic Details
Main Authors: Chen, Yawen, Yang, Jin-Yu Terence, Tang, Jin-Ming, Hong, Haizheng, Kao, Shuh-Ji, Dai, Minhan, Shi, Dalin
Format: Dataset
Language:English
Published: PANGAEA 2024
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.968756
https://doi.org/10.1594/PANGAEA.968756
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.968756
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.968756 2024-09-15T18:27:57+00:00 Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae Chen, Yawen Yang, Jin-Yu Terence Tang, Jin-Ming Hong, Haizheng Kao, Shuh-Ji Dai, Minhan Shi, Dalin 2024 text/tab-separated-values, 2680 data points https://doi.pangaea.de/10.1594/PANGAEA.968756 https://doi.org/10.1594/PANGAEA.968756 en eng PANGAEA Chen, Yawen; Yang, Jin-Yu Terence; Tang, Jin-Ming; Hong, Haizheng; Kao, Shuh-Ji; Dai, Minhan; Shi, Dalin (2024): Changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae under different pH and CO 2 conditions. Limnology and Oceanography, 69(5), 1045-1055, https://doi.org/10.1002/lno.12546 Yang, Jin-Yu Terence (2024): Dataset for the manuscript: Changes in isotope fractionation during nitrate assimilation by eukaryotic and prokaryotic algae under different pH and CO2 conditions [dataset]. Zenodo, https://doi.org/10.5281/ZENODO.10208321 Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.968756 https://doi.org/10.1594/PANGAEA.968756 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbon/Nitrogen ratio Carbonate ion Carbonate system computation flag Carbon dioxide Carbon per cell Cell biovolume Chromista Cyanobacteria Difference δ15N intracellular and medium nitrate Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth/Morphology Growth rate Laboratory experiment Laboratory strains Natural log of fractional remaining nitrate Nitrate dataset 2024 ftpangaea https://doi.org/10.1594/PANGAEA.96875610.1002/lno.1254610.5281/ZENODO.1020832110.5194/essd-2-167-2010 2024-07-24T02:31:35Z We measured N and O isotope effects during nitrate assimilation and physiological states of the marine diatom Thalassiosira weissflogii and Synechococcus under different pH (8.1 or 7.8) and pCO2 (400 or 800 μatm) conditions. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Zenodo (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-05-29. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbon/Nitrogen ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbon per cell
Cell biovolume
Chromista
Cyanobacteria
Difference δ15N
intracellular and medium nitrate
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Natural log of fractional remaining nitrate
Nitrate
spellingShingle Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbon/Nitrogen ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbon per cell
Cell biovolume
Chromista
Cyanobacteria
Difference δ15N
intracellular and medium nitrate
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Natural log of fractional remaining nitrate
Nitrate
Chen, Yawen
Yang, Jin-Yu Terence
Tang, Jin-Ming
Hong, Haizheng
Kao, Shuh-Ji
Dai, Minhan
Shi, Dalin
Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
topic_facet Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbon/Nitrogen ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Carbon per cell
Cell biovolume
Chromista
Cyanobacteria
Difference δ15N
intracellular and medium nitrate
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth/Morphology
Growth rate
Laboratory experiment
Laboratory strains
Natural log of fractional remaining nitrate
Nitrate
description We measured N and O isotope effects during nitrate assimilation and physiological states of the marine diatom Thalassiosira weissflogii and Synechococcus under different pH (8.1 or 7.8) and pCO2 (400 or 800 μatm) conditions. This dataset is included in the OA-ICC data compilation maintained in the framework of the IAEA Ocean Acidification International Coordination Centre (see https://oa-icc.ipsl.fr). Original data were downloaded from Zenodo (see Source) by the OA-ICC data curator. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-05-29.
format Dataset
author Chen, Yawen
Yang, Jin-Yu Terence
Tang, Jin-Ming
Hong, Haizheng
Kao, Shuh-Ji
Dai, Minhan
Shi, Dalin
author_facet Chen, Yawen
Yang, Jin-Yu Terence
Tang, Jin-Ming
Hong, Haizheng
Kao, Shuh-Ji
Dai, Minhan
Shi, Dalin
author_sort Chen, Yawen
title Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
title_short Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
title_full Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
title_fullStr Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
title_full_unstemmed Seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
title_sort seawater carbonate chemistry and changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae
publisher PANGAEA
publishDate 2024
url https://doi.pangaea.de/10.1594/PANGAEA.968756
https://doi.org/10.1594/PANGAEA.968756
genre Ocean acidification
genre_facet Ocean acidification
op_relation Chen, Yawen; Yang, Jin-Yu Terence; Tang, Jin-Ming; Hong, Haizheng; Kao, Shuh-Ji; Dai, Minhan; Shi, Dalin (2024): Changes in isotope fractionation during nitrate assimilation by marine eukaryotic and prokaryotic algae under different pH and CO 2 conditions. Limnology and Oceanography, 69(5), 1045-1055, https://doi.org/10.1002/lno.12546
Yang, Jin-Yu Terence (2024): Dataset for the manuscript: Changes in isotope fractionation during nitrate assimilation by eukaryotic and prokaryotic algae under different pH and CO2 conditions [dataset]. Zenodo, https://doi.org/10.5281/ZENODO.10208321
Nisumaa, Anne-Marin; Pesant, Stephane; Bellerby, Richard G J; Delille, Bruno; Middelburg, Jack J; Orr, James C; Riebesell, Ulf; Tyrrell, Toby; Wolf-Gladrow, Dieter A; Gattuso, Jean-Pierre (2010): EPOCA/EUR-OCEANS data compilation on the biological and biogeochemical responses to ocean acidification. Earth System Science Data, 2(2), 167-175, https://doi.org/10.5194/essd-2-167-2010
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2024): seacarb: seawater carbonate chemistry with R. R package version 3.3.3. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.968756
https://doi.org/10.1594/PANGAEA.968756
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.96875610.1002/lno.1254610.5281/ZENODO.1020832110.5194/essd-2-167-2010
_version_ 1810469253550178304