id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.967053
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.967053 2024-09-15T18:23:23+00:00 Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria Schwaner, Caroline Farhat, Sarah Barbosa, Michelle Boutet, Isabelle Tanguy, Arnaud Espinosa, Emmanuelle Pales Allam, Bassem MEDIAN LATITUDE: 41.154350 * MEDIAN LONGITUDE: -72.138450 * SOUTH-BOUND LATITUDE: 40.869000 * WEST-BOUND LONGITUDE: -73.343200 * NORTH-BOUND LATITUDE: 41.930500 * EAST-BOUND LONGITUDE: -70.031000 2024 text/tab-separated-values, 332 data points https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 en eng PANGAEA Schwaner, Caroline; Farhat, Sarah; Barbosa, Michelle; Boutet, Isabelle; Tanguy, Arnaud; Espinosa, Emmanuelle Pales; Allam, Bassem (2023): Molecular Features Associated with Resilience to Ocean Acidification in the Northern Quahog, Mercenaria mercenaria. Marine Biotechnology, 25(1), 83-99, https://doi.org/10.1007/s10126-022-10183-3 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using seacarb after Orr et al. (2018) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Fugacity of carbon dioxide in seawater Gene expression (incl. proteomics) Hampton_Bays Laboratory experiment Mercenaria mercenaria Mollusca North Atlantic Northport Number OA-ICC Ocean Acidification International Coordination Centre dataset 2024 ftpangaea https://doi.org/10.1594/PANGAEA.96705310.1007/s10126-022-10183-3 2024-07-24T02:31:35Z Northern quahog (Mercenaria mercenaria) were fertilized under normal pCO2 and reared under acidified (pH ~ 7.5, pCO2 ~ 1200 ppm) or control (pH ~ 7.9, pCO2 ~ 600 ppm) conditions before sampled at 2 days (larvae), 32 days (postsets), 5 and 10 months (juveniles) and submitted to RNA and DNA sequencing to evaluate alterations in gene expression and genetic variations. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-73.343200,-70.031000,41.930500,40.869000)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using seacarb after Orr et al. (2018)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Fugacity of carbon dioxide in seawater
Gene expression (incl. proteomics)
Hampton_Bays
Laboratory experiment
Mercenaria mercenaria
Mollusca
North Atlantic
Northport
Number
OA-ICC
Ocean Acidification International Coordination Centre
spellingShingle Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using seacarb after Orr et al. (2018)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Fugacity of carbon dioxide in seawater
Gene expression (incl. proteomics)
Hampton_Bays
Laboratory experiment
Mercenaria mercenaria
Mollusca
North Atlantic
Northport
Number
OA-ICC
Ocean Acidification International Coordination Centre
Schwaner, Caroline
Farhat, Sarah
Barbosa, Michelle
Boutet, Isabelle
Tanguy, Arnaud
Espinosa, Emmanuelle Pales
Allam, Bassem
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
topic_facet Alkalinity
total
standard deviation
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Calculated using seacarb after Orr et al. (2018)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Containers and aquaria (20-1000 L or < 1 m**2)
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Fugacity of carbon dioxide in seawater
Gene expression (incl. proteomics)
Hampton_Bays
Laboratory experiment
Mercenaria mercenaria
Mollusca
North Atlantic
Northport
Number
OA-ICC
Ocean Acidification International Coordination Centre
description Northern quahog (Mercenaria mercenaria) were fertilized under normal pCO2 and reared under acidified (pH ~ 7.5, pCO2 ~ 1200 ppm) or control (pH ~ 7.9, pCO2 ~ 600 ppm) conditions before sampled at 2 days (larvae), 32 days (postsets), 5 and 10 months (juveniles) and submitted to RNA and DNA sequencing to evaluate alterations in gene expression and genetic variations.
format Dataset
author Schwaner, Caroline
Farhat, Sarah
Barbosa, Michelle
Boutet, Isabelle
Tanguy, Arnaud
Espinosa, Emmanuelle Pales
Allam, Bassem
author_facet Schwaner, Caroline
Farhat, Sarah
Barbosa, Michelle
Boutet, Isabelle
Tanguy, Arnaud
Espinosa, Emmanuelle Pales
Allam, Bassem
author_sort Schwaner, Caroline
title Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
title_short Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
title_full Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
title_fullStr Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
title_full_unstemmed Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
title_sort seawater carbonate chemistry and cellular and alterations in gene expression in mercenaria mercenaria
publisher PANGAEA
publishDate 2024
url https://doi.pangaea.de/10.1594/PANGAEA.967053
https://doi.org/10.1594/PANGAEA.967053
op_coverage MEDIAN LATITUDE: 41.154350 * MEDIAN LONGITUDE: -72.138450 * SOUTH-BOUND LATITUDE: 40.869000 * WEST-BOUND LONGITUDE: -73.343200 * NORTH-BOUND LATITUDE: 41.930500 * EAST-BOUND LONGITUDE: -70.031000
long_lat ENVELOPE(-73.343200,-70.031000,41.930500,40.869000)
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation Schwaner, Caroline; Farhat, Sarah; Barbosa, Michelle; Boutet, Isabelle; Tanguy, Arnaud; Espinosa, Emmanuelle Pales; Allam, Bassem (2023): Molecular Features Associated with Resilience to Ocean Acidification in the Northern Quahog, Mercenaria mercenaria. Marine Biotechnology, 25(1), 83-99, https://doi.org/10.1007/s10126-022-10183-3
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.967053
https://doi.org/10.1594/PANGAEA.967053
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.96705310.1007/s10126-022-10183-3
_version_ 1810463586089172992