Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria
Northern quahog (Mercenaria mercenaria) were fertilized under normal pCO2 and reared under acidified (pH ~ 7.5, pCO2 ~ 1200 ppm) or control (pH ~ 7.9, pCO2 ~ 600 ppm) conditions before sampled at 2 days (larvae), 32 days (postsets), 5 and 10 months (juveniles) and submitted to RNA and DNA sequencing...
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2024
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.967053 2024-09-15T18:23:23+00:00 Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria Schwaner, Caroline Farhat, Sarah Barbosa, Michelle Boutet, Isabelle Tanguy, Arnaud Espinosa, Emmanuelle Pales Allam, Bassem MEDIAN LATITUDE: 41.154350 * MEDIAN LONGITUDE: -72.138450 * SOUTH-BOUND LATITUDE: 40.869000 * WEST-BOUND LONGITUDE: -73.343200 * NORTH-BOUND LATITUDE: 41.930500 * EAST-BOUND LONGITUDE: -70.031000 2024 text/tab-separated-values, 332 data points https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 en eng PANGAEA Schwaner, Caroline; Farhat, Sarah; Barbosa, Michelle; Boutet, Isabelle; Tanguy, Arnaud; Espinosa, Emmanuelle Pales; Allam, Bassem (2023): Molecular Features Associated with Resilience to Ocean Acidification in the Northern Quahog, Mercenaria mercenaria. Marine Biotechnology, 25(1), 83-99, https://doi.org/10.1007/s10126-022-10183-3 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using seacarb after Orr et al. (2018) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Fugacity of carbon dioxide in seawater Gene expression (incl. proteomics) Hampton_Bays Laboratory experiment Mercenaria mercenaria Mollusca North Atlantic Northport Number OA-ICC Ocean Acidification International Coordination Centre dataset 2024 ftpangaea https://doi.org/10.1594/PANGAEA.96705310.1007/s10126-022-10183-3 2024-07-24T02:31:35Z Northern quahog (Mercenaria mercenaria) were fertilized under normal pCO2 and reared under acidified (pH ~ 7.5, pCO2 ~ 1200 ppm) or control (pH ~ 7.9, pCO2 ~ 600 ppm) conditions before sampled at 2 days (larvae), 32 days (postsets), 5 and 10 months (juveniles) and submitted to RNA and DNA sequencing to evaluate alterations in gene expression and genetic variations. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-73.343200,-70.031000,41.930500,40.869000) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using seacarb after Orr et al. (2018) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Fugacity of carbon dioxide in seawater Gene expression (incl. proteomics) Hampton_Bays Laboratory experiment Mercenaria mercenaria Mollusca North Atlantic Northport Number OA-ICC Ocean Acidification International Coordination Centre |
spellingShingle |
Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using seacarb after Orr et al. (2018) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Fugacity of carbon dioxide in seawater Gene expression (incl. proteomics) Hampton_Bays Laboratory experiment Mercenaria mercenaria Mollusca North Atlantic Northport Number OA-ICC Ocean Acidification International Coordination Centre Schwaner, Caroline Farhat, Sarah Barbosa, Michelle Boutet, Isabelle Tanguy, Arnaud Espinosa, Emmanuelle Pales Allam, Bassem Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
topic_facet |
Alkalinity total standard deviation Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Calculated using seacarb after Orr et al. (2018) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Fugacity of carbon dioxide in seawater Gene expression (incl. proteomics) Hampton_Bays Laboratory experiment Mercenaria mercenaria Mollusca North Atlantic Northport Number OA-ICC Ocean Acidification International Coordination Centre |
description |
Northern quahog (Mercenaria mercenaria) were fertilized under normal pCO2 and reared under acidified (pH ~ 7.5, pCO2 ~ 1200 ppm) or control (pH ~ 7.9, pCO2 ~ 600 ppm) conditions before sampled at 2 days (larvae), 32 days (postsets), 5 and 10 months (juveniles) and submitted to RNA and DNA sequencing to evaluate alterations in gene expression and genetic variations. |
format |
Dataset |
author |
Schwaner, Caroline Farhat, Sarah Barbosa, Michelle Boutet, Isabelle Tanguy, Arnaud Espinosa, Emmanuelle Pales Allam, Bassem |
author_facet |
Schwaner, Caroline Farhat, Sarah Barbosa, Michelle Boutet, Isabelle Tanguy, Arnaud Espinosa, Emmanuelle Pales Allam, Bassem |
author_sort |
Schwaner, Caroline |
title |
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
title_short |
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
title_full |
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
title_fullStr |
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
title_full_unstemmed |
Seawater carbonate chemistry and cellular and alterations in gene expression in Mercenaria mercenaria |
title_sort |
seawater carbonate chemistry and cellular and alterations in gene expression in mercenaria mercenaria |
publisher |
PANGAEA |
publishDate |
2024 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 |
op_coverage |
MEDIAN LATITUDE: 41.154350 * MEDIAN LONGITUDE: -72.138450 * SOUTH-BOUND LATITUDE: 40.869000 * WEST-BOUND LONGITUDE: -73.343200 * NORTH-BOUND LATITUDE: 41.930500 * EAST-BOUND LONGITUDE: -70.031000 |
long_lat |
ENVELOPE(-73.343200,-70.031000,41.930500,40.869000) |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
Schwaner, Caroline; Farhat, Sarah; Barbosa, Michelle; Boutet, Isabelle; Tanguy, Arnaud; Espinosa, Emmanuelle Pales; Allam, Bassem (2023): Molecular Features Associated with Resilience to Ocean Acidification in the Northern Quahog, Mercenaria mercenaria. Marine Biotechnology, 25(1), 83-99, https://doi.org/10.1007/s10126-022-10183-3 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.967053 https://doi.org/10.1594/PANGAEA.967053 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.96705310.1007/s10126-022-10183-3 |
_version_ |
1810463586089172992 |