Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals
We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from...
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| Language: | English |
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PANGAEA
2024
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| Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.966769 https://doi.org/10.1594/PANGAEA.966769 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.966769 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.966769 2024-09-15T18:23:22+00:00 Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J MEDIAN LATITUDE: 20.883000 * MEDIAN LONGITUDE: -86.859000 * SOUTH-BOUND LATITUDE: 20.880000 * WEST-BOUND LONGITUDE: -86.861000 * NORTH-BOUND LATITUDE: 20.886000 * EAST-BOUND LONGITUDE: -86.857000 * DATE/TIME START: 2012-12-12T00:00:00 * DATE/TIME END: 2012-12-15T00:00:00 2024 text/tab-separated-values, 380 data points https://doi.pangaea.de/10.1594/PANGAEA.966769 https://doi.org/10.1594/PANGAEA.966769 en eng PANGAEA Radice, Veronica Z; Martinez, Ana; Paytan, Adina; Potts, Donald C; Barshis, Daniel J (2024): Complex dynamics of coral gene expression responses to low pH across species. Molecular Ecology, 33(1), e17186, https://doi.org/10.1111/mec.17186 Martinez, Ana; Crook, Elizabeth Derse; Barshis, Daniel J; Potts, Donald C; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2019): Seawater carbonate chemistry and calcification, survival, concentrations of Symbiodiniaceae, chlorophyll a and protein of Caribbean corals [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.913183 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb Gene expression of reef-building corals and algal symbionts (2022). https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 https://doi.pangaea.de/10.1594/PANGAEA.966769 https://doi.org/10.1594/PANGAEA.966769 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard error Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Calcification/Dissolution Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chlorophyll a Chlorophyll a per cell Cnidaria Coast and continental shelf Density Event label EXP Experiment Field experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Growth/Morphology Linear extension North Atlantic OA-ICC Ocean Acidification International Coordination Centre Ojo_Norte Ojo_Pargos dataset 2024 ftpangaea https://doi.org/10.1594/PANGAEA.96676910.1111/mec.1718610.1594/PANGAEA.913183 2024-07-24T02:31:35Z We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from low pH (Ojo) and ambient pH native origins (Lagoon or Reef). Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-86.861000,-86.857000,20.886000,20.880000) |
| institution |
Open Polar |
| collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
| op_collection_id |
ftpangaea |
| language |
English |
| topic |
Alkalinity total standard error Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Calcification/Dissolution Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chlorophyll a Chlorophyll a per cell Cnidaria Coast and continental shelf Density Event label EXP Experiment Field experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Growth/Morphology Linear extension North Atlantic OA-ICC Ocean Acidification International Coordination Centre Ojo_Norte Ojo_Pargos |
| spellingShingle |
Alkalinity total standard error Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Calcification/Dissolution Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chlorophyll a Chlorophyll a per cell Cnidaria Coast and continental shelf Density Event label EXP Experiment Field experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Growth/Morphology Linear extension North Atlantic OA-ICC Ocean Acidification International Coordination Centre Ojo_Norte Ojo_Pargos Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| topic_facet |
Alkalinity total standard error Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Biomass/Abundance/Elemental composition Calcification/Dissolution Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chlorophyll a Chlorophyll a per cell Cnidaria Coast and continental shelf Density Event label EXP Experiment Field experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Growth/Morphology Linear extension North Atlantic OA-ICC Ocean Acidification International Coordination Centre Ojo_Norte Ojo_Pargos |
| description |
We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from low pH (Ojo) and ambient pH native origins (Lagoon or Reef). |
| format |
Dataset |
| author |
Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J |
| author_facet |
Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J |
| author_sort |
Radice, Veronica Z |
| title |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| title_short |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| title_full |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| title_fullStr |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| title_full_unstemmed |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| title_sort |
seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals |
| publisher |
PANGAEA |
| publishDate |
2024 |
| url |
https://doi.pangaea.de/10.1594/PANGAEA.966769 https://doi.org/10.1594/PANGAEA.966769 |
| op_coverage |
MEDIAN LATITUDE: 20.883000 * MEDIAN LONGITUDE: -86.859000 * SOUTH-BOUND LATITUDE: 20.880000 * WEST-BOUND LONGITUDE: -86.861000 * NORTH-BOUND LATITUDE: 20.886000 * EAST-BOUND LONGITUDE: -86.857000 * DATE/TIME START: 2012-12-12T00:00:00 * DATE/TIME END: 2012-12-15T00:00:00 |
| long_lat |
ENVELOPE(-86.861000,-86.857000,20.886000,20.880000) |
| genre |
North Atlantic Ocean acidification |
| genre_facet |
North Atlantic Ocean acidification |
| op_relation |
Radice, Veronica Z; Martinez, Ana; Paytan, Adina; Potts, Donald C; Barshis, Daniel J (2024): Complex dynamics of coral gene expression responses to low pH across species. Molecular Ecology, 33(1), e17186, https://doi.org/10.1111/mec.17186 Martinez, Ana; Crook, Elizabeth Derse; Barshis, Daniel J; Potts, Donald C; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2019): Seawater carbonate chemistry and calcification, survival, concentrations of Symbiodiniaceae, chlorophyll a and protein of Caribbean corals [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.913183 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb Gene expression of reef-building corals and algal symbionts (2022). https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 https://doi.pangaea.de/10.1594/PANGAEA.966769 https://doi.org/10.1594/PANGAEA.966769 |
| op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
| op_doi |
https://doi.org/10.1594/PANGAEA.96676910.1111/mec.1718610.1594/PANGAEA.913183 |
| _version_ |
1810463564613287936 |