Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2
The continuous increase of anthropogenic CO2 in the atmosphere resulting in ocean acidification has been reported to affect brain function in some fishes. During adulthood, cell proliferation is fundamental for fish brain growth and for it to adapt in response to external stimuli, such as environmen...
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Language: | English |
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PANGAEA
2023
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.958748 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.958748 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Acanthochromis polyacanthus Alkalinity total standard deviation Amphiprion melanopus Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gasterosteus aculeatus Gene expression (incl. proteomics) Individual ID Laboratory experiment mRNA gene expression relative Nekton North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Salinity Single species South Pacific Species unique identification |
spellingShingle |
Acanthochromis polyacanthus Alkalinity total standard deviation Amphiprion melanopus Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gasterosteus aculeatus Gene expression (incl. proteomics) Individual ID Laboratory experiment mRNA gene expression relative Nekton North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Salinity Single species South Pacific Species unique identification Lai, Floriana Fagernes, Cathrine E Bernier, Nicholas J Miller, Garielle M Munday, Philip L Jutfelt, Fredrik Nilsson, Göran E Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
topic_facet |
Acanthochromis polyacanthus Alkalinity total standard deviation Amphiprion melanopus Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gasterosteus aculeatus Gene expression (incl. proteomics) Individual ID Laboratory experiment mRNA gene expression relative Nekton North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Salinity Single species South Pacific Species unique identification |
description |
The continuous increase of anthropogenic CO2 in the atmosphere resulting in ocean acidification has been reported to affect brain function in some fishes. During adulthood, cell proliferation is fundamental for fish brain growth and for it to adapt in response to external stimuli, such as environmental changes. Here we report the first expression study of genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback (Gasterosteus aculeatus), cinnamon anemonefish (Amphiprion melanopus) and spiny damselfish (Acanthochromis polyacanthus) exposed to elevated CO2. The mRNA expression levels of the neurogenic differentiation factor (NeuroD) and doublecortin (DCX) were upregulated in three-spined stickleback exposed to high-CO2 compared with controls, while no changes were detected in the other species. The mRNA expression levels of the proliferating cell nuclear antigen (PCNA) and the brain-derived neurotrophic factor (BDNF) remained unaffected in the high-CO2 exposed groups compared to the control in all three species. These results indicate a species-specific regulation of genes involved in neurogenesis in response to elevated ambient CO2 levels. The higher expression of NeuroD and DCX mRNA transcripts in the brain of high-CO2–exposed three-spined stickleback, together with the lack of effects on mRNA levels in cinnamon anemonefish and spiny damselfish, indicate differences in coping mechanisms among fish in response to the predicted-future CO2 level. |
format |
Dataset |
author |
Lai, Floriana Fagernes, Cathrine E Bernier, Nicholas J Miller, Garielle M Munday, Philip L Jutfelt, Fredrik Nilsson, Göran E |
author_facet |
Lai, Floriana Fagernes, Cathrine E Bernier, Nicholas J Miller, Garielle M Munday, Philip L Jutfelt, Fredrik Nilsson, Göran E |
author_sort |
Lai, Floriana |
title |
Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
title_short |
Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
title_full |
Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
title_fullStr |
Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
title_full_unstemmed |
Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 |
title_sort |
seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated co2 |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.958748 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
Lai, Floriana; Fagernes, Cathrine E; Bernier, Nicholas J; Miller, Garielle M; Munday, Philip L; Jutfelt, Fredrik; Nilsson, Göran E (2017): Responses of neurogenesis and neuroplasticity related genes to elevated CO 2 levels in the brain of three teleost species. Biology Letters, 13(8), 20170240, https://doi.org/10.1098/rsbl.2017.0240 Lai, Floriana; Fagernes, Cathrine E; Bernier, Nicholas J; Miller, Garielle M; Munday, Philip L; Jutfelt, Fredrik; Nilsson, Göran E (2017): Data from: Responses of neurogenesis and neuroplasticity related genes to elevated CO2 levels in the brain of three teleost species. Dryad, https://doi.org/10.5061/dryad.pn397 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.958748 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1098/rsbl.2017.024010.5061/dryad.pn397 |
_version_ |
1768371622191824896 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.958748 2023-06-11T04:15:05+02:00 Seawater carbonate chemistry and genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback, cinnamon anemonefish and spiny damselfish exposed to elevated CO2 Lai, Floriana Fagernes, Cathrine E Bernier, Nicholas J Miller, Garielle M Munday, Philip L Jutfelt, Fredrik Nilsson, Göran E 2023-05-10 text/tab-separated-values, 1474 data points https://doi.pangaea.de/10.1594/PANGAEA.958748 en eng PANGAEA Lai, Floriana; Fagernes, Cathrine E; Bernier, Nicholas J; Miller, Garielle M; Munday, Philip L; Jutfelt, Fredrik; Nilsson, Göran E (2017): Responses of neurogenesis and neuroplasticity related genes to elevated CO 2 levels in the brain of three teleost species. Biology Letters, 13(8), 20170240, https://doi.org/10.1098/rsbl.2017.0240 Lai, Floriana; Fagernes, Cathrine E; Bernier, Nicholas J; Miller, Garielle M; Munday, Philip L; Jutfelt, Fredrik; Nilsson, Göran E (2017): Data from: Responses of neurogenesis and neuroplasticity related genes to elevated CO2 levels in the brain of three teleost species. Dryad, https://doi.org/10.5061/dryad.pn397 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.958748 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Acanthochromis polyacanthus Alkalinity total standard deviation Amphiprion melanopus Animalia Aragonite saturation state Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Chordata Coast and continental shelf Containers and aquaria (20-1000 L or < 1 m**2) Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gasterosteus aculeatus Gene expression (incl. proteomics) Individual ID Laboratory experiment mRNA gene expression relative Nekton North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Salinity Single species South Pacific Species unique identification Dataset 2023 ftpangaea https://doi.org/10.1098/rsbl.2017.024010.5061/dryad.pn397 2023-05-11T09:06:51Z The continuous increase of anthropogenic CO2 in the atmosphere resulting in ocean acidification has been reported to affect brain function in some fishes. During adulthood, cell proliferation is fundamental for fish brain growth and for it to adapt in response to external stimuli, such as environmental changes. Here we report the first expression study of genes regulating neurogenesis and neuroplasticity in brains of three-spined stickleback (Gasterosteus aculeatus), cinnamon anemonefish (Amphiprion melanopus) and spiny damselfish (Acanthochromis polyacanthus) exposed to elevated CO2. The mRNA expression levels of the neurogenic differentiation factor (NeuroD) and doublecortin (DCX) were upregulated in three-spined stickleback exposed to high-CO2 compared with controls, while no changes were detected in the other species. The mRNA expression levels of the proliferating cell nuclear antigen (PCNA) and the brain-derived neurotrophic factor (BDNF) remained unaffected in the high-CO2 exposed groups compared to the control in all three species. These results indicate a species-specific regulation of genes involved in neurogenesis in response to elevated ambient CO2 levels. The higher expression of NeuroD and DCX mRNA transcripts in the brain of high-CO2–exposed three-spined stickleback, together with the lack of effects on mRNA levels in cinnamon anemonefish and spiny damselfish, indicate differences in coping mechanisms among fish in response to the predicted-future CO2 level. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science Pacific |