Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures
This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments...
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PANGAEA
2023
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.957395 https://doi.org/10.1594/PANGAEA.957395 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.957395 2024-10-13T14:09:27+00:00 Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures Stenvers, Vanessa Hauss, Helena Schmittmann, Lara Bayer, Till Havermans, Charlotte Hentschel, Ute Sweetman, Andrew K Hoving, Henk-Jan T MEDIAN LATITUDE: 56.347740 * MEDIAN LONGITUDE: 0.211790 * SOUTH-BOUND LATITUDE: 47.250220 * WEST-BOUND LONGITUDE: -10.104630 * NORTH-BOUND LATITUDE: 61.100000 * EAST-BOUND LONGITUDE: 5.585000 * DATE/TIME START: 2020-12-09T10:34:15 * DATE/TIME END: 2021-11-20T17:30:00 * MINIMUM ELEVATION: -4427.2 m * MAXIMUM ELEVATION: 0.0 m 2023 text/tab-separated-values, 2 data points https://doi.pangaea.de/10.1594/PANGAEA.957395 https://doi.org/10.1594/PANGAEA.957395 en eng PANGAEA Stenvers, Vanessa; Hauss, Helena; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Schmittmann, Lara; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Experimental mining plumes and ocean warming trigger stress in a deep pelagic jellyfish. Nature Communications, 14(1), 7352, https://doi.org/10.1038/s41467-023-43023-6 Stenvers, Vanessa; Hauss, Helena; Schmittmann, Lara; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Physiological and behavioural responses of the deep pelagic jellyfish Periphylla periphylla exposed to sediment plumes and increasing temperatures [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.957367 Stenvers, Vanessa; Hauss, Helena; Schmittmann, Lara; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Transcriptome expression in Periphylla periphylla exposed to sediment plumes and increasing temperatures [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.962217 Quast, Christian; Pruesse, Elmar; Yilmaz, Pelin; Gerken, Jan; Schweer, Timmy; Yarza, Pablo; Peplies, J; Glöckner, Frank Oliver (2012): The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Research, 41(D1), D590-D596, https://doi.org/10.1093/nar/gks1219 https://doi.pangaea.de/10.1594/PANGAEA.957395 https://doi.org/10.1594/PANGAEA.957395 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess BC Binary Object Binary Object (File Size) Binary Object (Media Type) Box corer Cnidaria Deep-sea mining File content GPF 20‐3_089H NAPTRAM iAtlantic Integrated Assessment of Atlantic Marine Ecosystems in Space and Time Jellyfish Lurefjord_Norway_Periphylla_Sampling_1 microbiome North Atlantic Ocean Norwegian fjord ocean warming Periphylla periphylla SO279 SO279_8-1 Sognefjord_Norway_Periphylla_Sampling_2 Sonne_2 dataset 2023 ftpangaea https://doi.org/10.1594/PANGAEA.95739510.1038/s41467-023-43023-610.1594/PANGAEA.95736710.1594/PANGAEA.96221710.1093/nar/gks1219 2024-10-02T00:42:44Z This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments, using Periphylla collected in the Lurefjord and Sognefjord, Norway, in 2021. Microbial community composition is given in raw counts for each amplicon sequence variant (ASV) encountered, based on 16S rRNA sequencing. Taxonomy for each ASV is listed, including Kingdom, Phylum, Class, Order, Family, Genus and Species, which were assigned using QIIME2 and the Silva 132 99% OTUs 16S rRNA database (Quast et al. 2013). Dataset North Atlantic PANGAEA - Data Publisher for Earth & Environmental Science Norway ENVELOPE(-10.104630,5.585000,61.100000,47.250220) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
BC Binary Object Binary Object (File Size) Binary Object (Media Type) Box corer Cnidaria Deep-sea mining File content GPF 20‐3_089H NAPTRAM iAtlantic Integrated Assessment of Atlantic Marine Ecosystems in Space and Time Jellyfish Lurefjord_Norway_Periphylla_Sampling_1 microbiome North Atlantic Ocean Norwegian fjord ocean warming Periphylla periphylla SO279 SO279_8-1 Sognefjord_Norway_Periphylla_Sampling_2 Sonne_2 |
spellingShingle |
BC Binary Object Binary Object (File Size) Binary Object (Media Type) Box corer Cnidaria Deep-sea mining File content GPF 20‐3_089H NAPTRAM iAtlantic Integrated Assessment of Atlantic Marine Ecosystems in Space and Time Jellyfish Lurefjord_Norway_Periphylla_Sampling_1 microbiome North Atlantic Ocean Norwegian fjord ocean warming Periphylla periphylla SO279 SO279_8-1 Sognefjord_Norway_Periphylla_Sampling_2 Sonne_2 Stenvers, Vanessa Hauss, Helena Schmittmann, Lara Bayer, Till Havermans, Charlotte Hentschel, Ute Sweetman, Andrew K Hoving, Henk-Jan T Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
topic_facet |
BC Binary Object Binary Object (File Size) Binary Object (Media Type) Box corer Cnidaria Deep-sea mining File content GPF 20‐3_089H NAPTRAM iAtlantic Integrated Assessment of Atlantic Marine Ecosystems in Space and Time Jellyfish Lurefjord_Norway_Periphylla_Sampling_1 microbiome North Atlantic Ocean Norwegian fjord ocean warming Periphylla periphylla SO279 SO279_8-1 Sognefjord_Norway_Periphylla_Sampling_2 Sonne_2 |
description |
This dataset comprises the microbial community composition associated with the outer bell of the deep pelagic jellyfish Periphylla periphylla exposed to anthropogenic disturbance. Specifically, we tested the effects of ocean warming and sediment plumes from deep-sea mining during ex situ experiments, using Periphylla collected in the Lurefjord and Sognefjord, Norway, in 2021. Microbial community composition is given in raw counts for each amplicon sequence variant (ASV) encountered, based on 16S rRNA sequencing. Taxonomy for each ASV is listed, including Kingdom, Phylum, Class, Order, Family, Genus and Species, which were assigned using QIIME2 and the Silva 132 99% OTUs 16S rRNA database (Quast et al. 2013). |
format |
Dataset |
author |
Stenvers, Vanessa Hauss, Helena Schmittmann, Lara Bayer, Till Havermans, Charlotte Hentschel, Ute Sweetman, Andrew K Hoving, Henk-Jan T |
author_facet |
Stenvers, Vanessa Hauss, Helena Schmittmann, Lara Bayer, Till Havermans, Charlotte Hentschel, Ute Sweetman, Andrew K Hoving, Henk-Jan T |
author_sort |
Stenvers, Vanessa |
title |
Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
title_short |
Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
title_full |
Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
title_fullStr |
Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
title_full_unstemmed |
Microbial community composition associated with Periphylla periphylla exposed to sediment plumes and increasing temperatures |
title_sort |
microbial community composition associated with periphylla periphylla exposed to sediment plumes and increasing temperatures |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.957395 https://doi.org/10.1594/PANGAEA.957395 |
op_coverage |
MEDIAN LATITUDE: 56.347740 * MEDIAN LONGITUDE: 0.211790 * SOUTH-BOUND LATITUDE: 47.250220 * WEST-BOUND LONGITUDE: -10.104630 * NORTH-BOUND LATITUDE: 61.100000 * EAST-BOUND LONGITUDE: 5.585000 * DATE/TIME START: 2020-12-09T10:34:15 * DATE/TIME END: 2021-11-20T17:30:00 * MINIMUM ELEVATION: -4427.2 m * MAXIMUM ELEVATION: 0.0 m |
long_lat |
ENVELOPE(-10.104630,5.585000,61.100000,47.250220) |
geographic |
Norway |
geographic_facet |
Norway |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
Stenvers, Vanessa; Hauss, Helena; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Schmittmann, Lara; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Experimental mining plumes and ocean warming trigger stress in a deep pelagic jellyfish. Nature Communications, 14(1), 7352, https://doi.org/10.1038/s41467-023-43023-6 Stenvers, Vanessa; Hauss, Helena; Schmittmann, Lara; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Physiological and behavioural responses of the deep pelagic jellyfish Periphylla periphylla exposed to sediment plumes and increasing temperatures [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.957367 Stenvers, Vanessa; Hauss, Helena; Schmittmann, Lara; Bayer, Till; Havermans, Charlotte; Hentschel, Ute; Sweetman, Andrew K; Hoving, Henk-Jan T (2023): Transcriptome expression in Periphylla periphylla exposed to sediment plumes and increasing temperatures [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.962217 Quast, Christian; Pruesse, Elmar; Yilmaz, Pelin; Gerken, Jan; Schweer, Timmy; Yarza, Pablo; Peplies, J; Glöckner, Frank Oliver (2012): The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Research, 41(D1), D590-D596, https://doi.org/10.1093/nar/gks1219 https://doi.pangaea.de/10.1594/PANGAEA.957395 https://doi.org/10.1594/PANGAEA.957395 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.95739510.1038/s41467-023-43023-610.1594/PANGAEA.95736710.1594/PANGAEA.96221710.1093/nar/gks1219 |
_version_ |
1812816443407859712 |