Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium

Growth of the prominent nitrogen-fixing cyanobacterium Trichodesmium is often limited by phosphorus availability in the ocean. How nitrogen fixation by phosphorus-limited Trichodesmium may respond to ocean acidification remains poorly understood. Here, we use phosphate-limited chemostat experiments...

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Main Authors: Zhang, Futing, Wen, Zuozhu, Wang, Shanlin, Tang, Weiyi, Luo, Yawei, Kranz, Sven A, Hong, Haizheng, Shi, Dalin
Format: Dataset
Language:English
Published: PANGAEA 2023
Subjects:
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.957342
https://doi.org/10.1594/PANGAEA.957342
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.957342
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.957342 2024-09-15T18:28:18+00:00 Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium Zhang, Futing Wen, Zuozhu Wang, Shanlin Tang, Weiyi Luo, Yawei Kranz, Sven A Hong, Haizheng Shi, Dalin MEDIAN LATITUDE: 19.096197 * MEDIAN LONGITUDE: 116.342158 * SOUTH-BOUND LATITUDE: 16.525000 * WEST-BOUND LONGITUDE: 115.000000 * NORTH-BOUND LATITUDE: 20.798000 * EAST-BOUND LONGITUDE: 118.460300 2023 text/tab-separated-values, 6821 data points https://doi.pangaea.de/10.1594/PANGAEA.957342 https://doi.org/10.1594/PANGAEA.957342 en eng PANGAEA Zhang, Futing; Wen, Zuozhu; Wang, Shanlin; Tang, Weiyi; Luo, Ya-Wei; Kranz, Sven A; Hong, Haizheng; Shi, Dalin (2022): Phosphate limitation intensifies negative effects of ocean acidification on globally important nitrogen fixing cyanobacterium. Nature Communications, 13(1), 6730, https://doi.org/10.1038/s41467-022-34586-x Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.957342 https://doi.org/10.1594/PANGAEA.957342 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Adenosine 5-Triphosphate per cell Alkaline phosphatase para-Nitrophenylphosphate per cell Alkalinity total Aragonite saturation state Bacteria Bicarbonate ion Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate/Phosphorus particulate ratio Carbonate ion Carbonate system computation flag Carbon dioxide Cell length standard deviation width Cell density Chlorophyll a Chlorophyll a per cell Cyanobacteria Day of experiment Entire community Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene copies Gene expression Gene expression (incl. proteomics) Glutamate per cell Growth/Morphology Laboratory experiment Laboratory strains LATITUDE Lipids per cell dataset 2023 ftpangaea https://doi.org/10.1594/PANGAEA.95734210.1038/s41467-022-34586-x 2024-07-24T02:31:35Z Growth of the prominent nitrogen-fixing cyanobacterium Trichodesmium is often limited by phosphorus availability in the ocean. How nitrogen fixation by phosphorus-limited Trichodesmium may respond to ocean acidification remains poorly understood. Here, we use phosphate-limited chemostat experiments to show that acidification enhanced phosphorus demands and decreased phosphorus-specific nitrogen fixation rates in Trichodesmium. The increased phosphorus requirements were attributed primarily to elevated cellular polyphosphate contents, likely for maintaining cytosolic pH homeostasis in response to acidification. Alongside the accumulation of polyphosphate, decreased NADP(H):NAD(H) ratios and impaired chlorophyll synthesis and energy production were observed under acidified conditions. Consequently, the negative effects of acidification were amplified compared to those demonstrated previously under phosphorus sufficiency. Estimating the potential implications of this finding, using outputs from the Community Earth System Model, predicts that acidification and dissolved inorganic and organic phosphorus stress could synergistically cause an appreciable decrease in global Trichodesmium nitrogen fixation by 2100. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(115.000000,118.460300,20.798000,16.525000)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Adenosine 5-Triphosphate
per cell
Alkaline phosphatase
para-Nitrophenylphosphate per cell
Alkalinity
total
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate/Phosphorus
particulate ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell
length
standard deviation
width
Cell density
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Day of experiment
Entire community
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene copies
Gene expression
Gene expression (incl. proteomics)
Glutamate per cell
Growth/Morphology
Laboratory experiment
Laboratory strains
LATITUDE
Lipids per cell
spellingShingle Adenosine 5-Triphosphate
per cell
Alkaline phosphatase
para-Nitrophenylphosphate per cell
Alkalinity
total
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate/Phosphorus
particulate ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell
length
standard deviation
width
Cell density
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Day of experiment
Entire community
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene copies
Gene expression
Gene expression (incl. proteomics)
Glutamate per cell
Growth/Morphology
Laboratory experiment
Laboratory strains
LATITUDE
Lipids per cell
Zhang, Futing
Wen, Zuozhu
Wang, Shanlin
Tang, Weiyi
Luo, Yawei
Kranz, Sven A
Hong, Haizheng
Shi, Dalin
Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
topic_facet Adenosine 5-Triphosphate
per cell
Alkaline phosphatase
para-Nitrophenylphosphate per cell
Alkalinity
total
Aragonite saturation state
Bacteria
Bicarbonate ion
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate/Phosphorus
particulate ratio
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cell
length
standard deviation
width
Cell density
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Day of experiment
Entire community
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Gene copies
Gene expression
Gene expression (incl. proteomics)
Glutamate per cell
Growth/Morphology
Laboratory experiment
Laboratory strains
LATITUDE
Lipids per cell
description Growth of the prominent nitrogen-fixing cyanobacterium Trichodesmium is often limited by phosphorus availability in the ocean. How nitrogen fixation by phosphorus-limited Trichodesmium may respond to ocean acidification remains poorly understood. Here, we use phosphate-limited chemostat experiments to show that acidification enhanced phosphorus demands and decreased phosphorus-specific nitrogen fixation rates in Trichodesmium. The increased phosphorus requirements were attributed primarily to elevated cellular polyphosphate contents, likely for maintaining cytosolic pH homeostasis in response to acidification. Alongside the accumulation of polyphosphate, decreased NADP(H):NAD(H) ratios and impaired chlorophyll synthesis and energy production were observed under acidified conditions. Consequently, the negative effects of acidification were amplified compared to those demonstrated previously under phosphorus sufficiency. Estimating the potential implications of this finding, using outputs from the Community Earth System Model, predicts that acidification and dissolved inorganic and organic phosphorus stress could synergistically cause an appreciable decrease in global Trichodesmium nitrogen fixation by 2100.
format Dataset
author Zhang, Futing
Wen, Zuozhu
Wang, Shanlin
Tang, Weiyi
Luo, Yawei
Kranz, Sven A
Hong, Haizheng
Shi, Dalin
author_facet Zhang, Futing
Wen, Zuozhu
Wang, Shanlin
Tang, Weiyi
Luo, Yawei
Kranz, Sven A
Hong, Haizheng
Shi, Dalin
author_sort Zhang, Futing
title Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
title_short Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
title_full Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
title_fullStr Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
title_full_unstemmed Seawater carbonate chemistry and nitrogen fixation by phosphorus-limited Trichodesmium
title_sort seawater carbonate chemistry and nitrogen fixation by phosphorus-limited trichodesmium
publisher PANGAEA
publishDate 2023
url https://doi.pangaea.de/10.1594/PANGAEA.957342
https://doi.org/10.1594/PANGAEA.957342
op_coverage MEDIAN LATITUDE: 19.096197 * MEDIAN LONGITUDE: 116.342158 * SOUTH-BOUND LATITUDE: 16.525000 * WEST-BOUND LONGITUDE: 115.000000 * NORTH-BOUND LATITUDE: 20.798000 * EAST-BOUND LONGITUDE: 118.460300
long_lat ENVELOPE(115.000000,118.460300,20.798000,16.525000)
genre Ocean acidification
genre_facet Ocean acidification
op_relation Zhang, Futing; Wen, Zuozhu; Wang, Shanlin; Tang, Weiyi; Luo, Ya-Wei; Kranz, Sven A; Hong, Haizheng; Shi, Dalin (2022): Phosphate limitation intensifies negative effects of ocean acidification on globally important nitrogen fixing cyanobacterium. Nature Communications, 13(1), 6730, https://doi.org/10.1038/s41467-022-34586-x
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2022): seacarb: seawater carbonate chemistry with R. R package version 3.3.1. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.957342
https://doi.org/10.1594/PANGAEA.957342
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.95734210.1038/s41467-022-34586-x
_version_ 1810469649202020352