Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA

The geological storage of carbon dioxide (CO2) is expected to be an important component of future global carbon emission mitigation, but there is a need to understand the impacts of a CO2 leak on the marine environment and to develop monitoring protocols for leakage detection. In the present study,...

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Main Authors: Tait, Karen, Beesley, A, Findlay, Helen S, McNeill, C L, Widdicombe, Stephen
Format: Dataset
Language:English
Published: PANGAEA 2016
Subjects:
EXP
pH
Online Access:https://doi.pangaea.de/10.1594/PANGAEA.956023
https://doi.org/10.1594/PANGAEA.956023
id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.956023
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.956023 2024-09-15T18:24:09+00:00 Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA Tait, Karen Beesley, A Findlay, Helen S McNeill, C L Widdicombe, Stephen LATITUDE: 50.192500 * LONGITUDE: -4.283300 * DATE/TIME START: 2010-09-15T00:00:00 * DATE/TIME END: 2010-09-15T00:00:00 2016 text/tab-separated-values, 1400 data points https://doi.pangaea.de/10.1594/PANGAEA.956023 https://doi.org/10.1594/PANGAEA.956023 en eng PANGAEA Tait, Karen; Beesley, A; Findlay, Helen S; McNeill, C L; Widdicombe, Stephen (2015): Elevated CO 2 induces a bloom of microphytobenthos within a shell gravel mesocosm. FEMS Microbiology Ecology, 91(8), fiv092, https://doi.org/10.1093/femsec/fiv092 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html Tait, Karen (2013): Elevated CO2 induces a bloom of microphytobenthos [dataset]. European Nucleotide Archive, https://www.ebi.ac.uk/ena/browser/view/PRJEB1669 https://doi.pangaea.de/10.1594/PANGAEA.956023 https://doi.org/10.1594/PANGAEA.956023 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess 16S gene copy number per unit sediment mass Alkalinity total Ammonia Aragonite saturation state Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Community composition and diversity Core Entire community EXP Experiment Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Identification Laboratory experiment Nitrate Nitrite North Atlantic OA-ICC Ocean Acidification International Coordination Centre Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH Phosphate Salinity Silicate flux Soft-bottom community Temperate Temperature water Time in weeks Treatment: pH Type Western_English_Channel dataset 2016 ftpangaea https://doi.org/10.1594/PANGAEA.95602310.1093/femsec/fiv092 2024-08-21T00:02:27Z The geological storage of carbon dioxide (CO2) is expected to be an important component of future global carbon emission mitigation, but there is a need to understand the impacts of a CO2 leak on the marine environment and to develop monitoring protocols for leakage detection. In the present study, sediment cores were exposed to CO2-acidified seawater at one of five pH levels (8.0, 7.5, 7.0, 6.5 and 6.0) for 10 weeks. A bloom of Spirulina sp. and diatoms appeared on sediment surface exposed to pH 7.0 and 7.5 seawater. Quantitative PCR measurements of the abundance of 16S rRNA also indicated an increase to the abundance of microbial 16S rRNA within the pH 7.0 and 7.5 treatments after 10 weeks incubation. More detailed analysis of the microbial communities from the pH 7.0, 7.5 and 8.0 treatments confirmed an increase in the relative abundance of Spirulina sp. and Navicula sp. sequences, with changes to the relative abundance of major archaeal and bacterial groups also detected within the pH 7.0 treatment. A decreased flux of silicate from the sediment at this pH was also detected. Monitoring for blooms of microphytobenthos may prove useful as an indicator of CO2 leakage within coastal areas. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-4.283300,-4.283300,50.192500,50.192500)
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic 16S gene copy number per unit sediment mass
Alkalinity
total
Ammonia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Community composition and diversity
Core
Entire community
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Nitrate
Nitrite
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phosphate
Salinity
Silicate
flux
Soft-bottom community
Temperate
Temperature
water
Time in weeks
Treatment: pH
Type
Western_English_Channel
spellingShingle 16S gene copy number per unit sediment mass
Alkalinity
total
Ammonia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Community composition and diversity
Core
Entire community
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Nitrate
Nitrite
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phosphate
Salinity
Silicate
flux
Soft-bottom community
Temperate
Temperature
water
Time in weeks
Treatment: pH
Type
Western_English_Channel
Tait, Karen
Beesley, A
Findlay, Helen S
McNeill, C L
Widdicombe, Stephen
Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
topic_facet 16S gene copy number per unit sediment mass
Alkalinity
total
Ammonia
Aragonite saturation state
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Coast and continental shelf
Community composition and diversity
Core
Entire community
EXP
Experiment
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Identification
Laboratory experiment
Nitrate
Nitrite
North Atlantic
OA-ICC
Ocean Acidification International Coordination Centre
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
Phosphate
Salinity
Silicate
flux
Soft-bottom community
Temperate
Temperature
water
Time in weeks
Treatment: pH
Type
Western_English_Channel
description The geological storage of carbon dioxide (CO2) is expected to be an important component of future global carbon emission mitigation, but there is a need to understand the impacts of a CO2 leak on the marine environment and to develop monitoring protocols for leakage detection. In the present study, sediment cores were exposed to CO2-acidified seawater at one of five pH levels (8.0, 7.5, 7.0, 6.5 and 6.0) for 10 weeks. A bloom of Spirulina sp. and diatoms appeared on sediment surface exposed to pH 7.0 and 7.5 seawater. Quantitative PCR measurements of the abundance of 16S rRNA also indicated an increase to the abundance of microbial 16S rRNA within the pH 7.0 and 7.5 treatments after 10 weeks incubation. More detailed analysis of the microbial communities from the pH 7.0, 7.5 and 8.0 treatments confirmed an increase in the relative abundance of Spirulina sp. and Navicula sp. sequences, with changes to the relative abundance of major archaeal and bacterial groups also detected within the pH 7.0 treatment. A decreased flux of silicate from the sediment at this pH was also detected. Monitoring for blooms of microphytobenthos may prove useful as an indicator of CO2 leakage within coastal areas.
format Dataset
author Tait, Karen
Beesley, A
Findlay, Helen S
McNeill, C L
Widdicombe, Stephen
author_facet Tait, Karen
Beesley, A
Findlay, Helen S
McNeill, C L
Widdicombe, Stephen
author_sort Tait, Karen
title Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
title_short Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
title_full Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
title_fullStr Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
title_full_unstemmed Seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16S rRNAA
title_sort seawater carbonate chemistry and abundance of cyanobacterial, micro-algal 16s rrnaa
publisher PANGAEA
publishDate 2016
url https://doi.pangaea.de/10.1594/PANGAEA.956023
https://doi.org/10.1594/PANGAEA.956023
op_coverage LATITUDE: 50.192500 * LONGITUDE: -4.283300 * DATE/TIME START: 2010-09-15T00:00:00 * DATE/TIME END: 2010-09-15T00:00:00
long_lat ENVELOPE(-4.283300,-4.283300,50.192500,50.192500)
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation Tait, Karen; Beesley, A; Findlay, Helen S; McNeill, C L; Widdicombe, Stephen (2015): Elevated CO 2 induces a bloom of microphytobenthos within a shell gravel mesocosm. FEMS Microbiology Ecology, 91(8), fiv092, https://doi.org/10.1093/femsec/fiv092
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Tait, Karen (2013): Elevated CO2 induces a bloom of microphytobenthos [dataset]. European Nucleotide Archive, https://www.ebi.ac.uk/ena/browser/view/PRJEB1669
https://doi.pangaea.de/10.1594/PANGAEA.956023
https://doi.org/10.1594/PANGAEA.956023
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.95602310.1093/femsec/fiv092
_version_ 1810464457341534208