Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N
This data set composes a large amount of quality controlled in situ measurements of major pigments based on HPLC collected from various expeditions across the Atlantic Ocean spanning from 71°S to 84°N, including 11 expeditions with RV Polarstern from the North Atlantic to the Arctic Fram Strait: PS7...
Main Authors: | , , , , , , , , , , , |
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Format: | Dataset |
Language: | English |
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PANGAEA
2023
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.954738 https://doi.org/10.1594/PANGAEA.954738 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.954738 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
19-Butanoyloxyfucoxanthin 19-Hexanoyloxyfucoxanthin AC3 Alloxanthin AMT28 AMT28_10-33 AMT28_1-1 AMT28_11-36 AMT28_12-41 AMT28_13-44 AMT28_14-48 AMT28_15-50 AMT28_16-57 AMT28_17-58 AMT28_18-64 AMT28_19-66 AMT28_20-71 AMT28_21-73 AMT28_22-78 AMT28_23-80 AMT28_2-4 AMT28_24-85 AMT28_25-87 AMT28_27-93 AMT28_28-95 AMT28_29-100 AMT28_30-101 AMT28_31-105 AMT28_32-111 AMT28_33-112 AMT28_34-117 AMT28_35-120 AMT28_36-124 AMT28_37-126 AMT28_3-8 AMT28_38-133 AMT28_40-137 AMT28_4-11 AMT28_41-142 AMT28_43-147 AMT28_44-150 AMT28_45-155 AMT28_46-158 AMT28_47-164 AMT28_48-166 AMT28_49-174 AMT28_50-176 AMT28_51-181 AMT28_5-13 AMT28_52-183 |
spellingShingle |
19-Butanoyloxyfucoxanthin 19-Hexanoyloxyfucoxanthin AC3 Alloxanthin AMT28 AMT28_10-33 AMT28_1-1 AMT28_11-36 AMT28_12-41 AMT28_13-44 AMT28_14-48 AMT28_15-50 AMT28_16-57 AMT28_17-58 AMT28_18-64 AMT28_19-66 AMT28_20-71 AMT28_21-73 AMT28_22-78 AMT28_23-80 AMT28_2-4 AMT28_24-85 AMT28_25-87 AMT28_27-93 AMT28_28-95 AMT28_29-100 AMT28_30-101 AMT28_31-105 AMT28_32-111 AMT28_33-112 AMT28_34-117 AMT28_35-120 AMT28_36-124 AMT28_37-126 AMT28_3-8 AMT28_38-133 AMT28_40-137 AMT28_4-11 AMT28_41-142 AMT28_43-147 AMT28_44-150 AMT28_45-155 AMT28_46-158 AMT28_47-164 AMT28_48-166 AMT28_49-174 AMT28_50-176 AMT28_51-181 AMT28_5-13 AMT28_52-183 Xi, Hongyan Peeken, Ilka Gomes, Mara Brotas, Vanda Tilstone, Gavin H Brewin, Robert J W Dall'Olmo, Giorgio Tracana, Andreia Alvarado, Leonardo M A Murawski, Sandra Wiegmann, Sonja Bracher, Astrid Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
topic_facet |
19-Butanoyloxyfucoxanthin 19-Hexanoyloxyfucoxanthin AC3 Alloxanthin AMT28 AMT28_10-33 AMT28_1-1 AMT28_11-36 AMT28_12-41 AMT28_13-44 AMT28_14-48 AMT28_15-50 AMT28_16-57 AMT28_17-58 AMT28_18-64 AMT28_19-66 AMT28_20-71 AMT28_21-73 AMT28_22-78 AMT28_23-80 AMT28_2-4 AMT28_24-85 AMT28_25-87 AMT28_27-93 AMT28_28-95 AMT28_29-100 AMT28_30-101 AMT28_31-105 AMT28_32-111 AMT28_33-112 AMT28_34-117 AMT28_35-120 AMT28_36-124 AMT28_37-126 AMT28_3-8 AMT28_38-133 AMT28_40-137 AMT28_4-11 AMT28_41-142 AMT28_43-147 AMT28_44-150 AMT28_45-155 AMT28_46-158 AMT28_47-164 AMT28_48-166 AMT28_49-174 AMT28_50-176 AMT28_51-181 AMT28_5-13 AMT28_52-183 |
description |
This data set composes a large amount of quality controlled in situ measurements of major pigments based on HPLC collected from various expeditions across the Atlantic Ocean spanning from 71°S to 84°N, including 11 expeditions with RV Polarstern from the North Atlantic to the Arctic Fram Strait: PS74, PSS76, PS78, PS80, PS85, PS93.2 (https://doi.org/10.1594/PANGAEA.894872), PS99.1 (https://doi.org/10.1594/PANGAEA.905502), PS99.2 ( https://doi.org/10.1594/PANGAEA.894874), PS106 (https://doi.org/10.1594/PANGAEA.899284), PS107 (https://doi.org/10.1594/PANGAEA.894860), PS121 (https://doi.org/10.1594/PANGAEA.941011), four expeditions (two with RV Polarstern and two Atlantic Meridional Transect expeditions with RRS James Clark Ross and RRS Discovery) in the trans-Atlantic Ocean: PS113 ( https://doi.org/10.1594/PANGAEA.911061), PS120, AMT28 and AMT29, and one expedition with RV Polarstern in the Southern Ocean: PS103 (https://doi.org/10.1594/PANGAEA.898941). Chlorophyll a concentration (Chl-a) of six phytoplankton functions groups (PFTs) derived from these pigments have been also included. This published data set has contributed to validate satellite PFT products available on the EU funded Copernicus Marine Service (CMEMS, https://marine.copernicus.eu/), which are derived from multi-sensor ocean colour reflectance data and sea surface temperature using an empirical orthogonal function based approach (Xi et al. 2020; 2021). Description on in situ PFT Chl-a determination from pigment data: PFT Chl-a in this data set were derived using an updated diagnostic pigment analysis (DPA) method (Soppa et al., 2014; Losa et al., 2017) with retuned coefficients by Alvarado et al (2021), that was originally developed by Vidussi et al. (2001), adapted in Uitz et al. (2006) and further refined by Hirata et al. (2011) and Brewin et al. (2015). The values of retuned DPA weighting coefficients for PFT Chl-a determination are: 1.56 for fucoxanthin, 1.53 for peridinin, 0.89 for 19'-hexanoyloxyfucoxanthin, 0.44 for ... |
format |
Dataset |
author |
Xi, Hongyan Peeken, Ilka Gomes, Mara Brotas, Vanda Tilstone, Gavin H Brewin, Robert J W Dall'Olmo, Giorgio Tracana, Andreia Alvarado, Leonardo M A Murawski, Sandra Wiegmann, Sonja Bracher, Astrid |
author_facet |
Xi, Hongyan Peeken, Ilka Gomes, Mara Brotas, Vanda Tilstone, Gavin H Brewin, Robert J W Dall'Olmo, Giorgio Tracana, Andreia Alvarado, Leonardo M A Murawski, Sandra Wiegmann, Sonja Bracher, Astrid |
author_sort |
Xi, Hongyan |
title |
Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
title_short |
Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
title_full |
Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
title_fullStr |
Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
title_full_unstemmed |
Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N |
title_sort |
phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the atlantic ocean from 71°s to 84°n |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.954738 https://doi.org/10.1594/PANGAEA.954738 |
op_coverage |
MEDIAN LATITUDE: 34.627003 * MEDIAN LONGITUDE: -8.107076 * SOUTH-BOUND LATITUDE: -71.364530 * WEST-BOUND LONGITUDE: -60.712180 * NORTH-BOUND LATITUDE: 83.661330 * EAST-BOUND LONGITUDE: 34.040000 * DATE/TIME START: 2009-06-22T18:58:00 * DATE/TIME END: 2019-11-22T08:52:00 * MINIMUM ELEVATION: -5686.0 m * MAXIMUM ELEVATION: -28.8 m |
long_lat |
ENVELOPE(-60.712180,34.040000,83.661330,-71.364530) |
genre |
Fram Strait North Atlantic Phytoplankton Southern Ocean |
genre_facet |
Fram Strait North Atlantic Phytoplankton Southern Ocean |
op_relation |
Xi, Hongyan; Bretagnon, Marine; Losa, Svetlana N; Brotas, Vanda; Gomes, Mara; Peeken, Ilka; Alvarado, Leonardo M A; Mangin, Antoine; Bracher, Astrid (2023): Satellite monitoring of surface phytoplankton functional types in the Atlantic Ocean over 20 years (2002–2021). in: 7th edition of the Copernicus Ocean State Report (OSR7), edited by: von Schuckmann, K., Moreira, L., Le Traon, P.-Y., Grégoire, M., Marcos, M., Staneva, J., Brasseur, P., Garric, G., Lionello, P., Karstensen, J., and Neukermans, G., State of the Planet, 1-osr7(5), https://doi.org/10.5194/sp-1-osr7-5-2023 Bracher, Astrid (2019): Phytoplankton pigment concentrations during RV Sonne cruise SO243 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898920 Bracher, Astrid (2019): Phytoplankton pigment concentrations in the Southern Ocean during RV POLARSTERN cruise PS103 in Dec 2016 to Jan 2017 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898941 Bracher, Astrid; Cheah, Wee; Wiegmann, Sonja (2019): Phytoplankton pigment concentrations in the tropical Indian Ocean in July and August 2014 during RV Sonne cruises SO234 and SO235 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898929 Bracher, Astrid; Wiegmann, Sonja (2019): Phytoplankton pigment concentrations in the North Sea and Sogne Fjord from 29 April to 7 May 2016 during RV HEINCKE cruise HE462 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.899043 Bracher, Astrid; Wiegmann, Sonja; Xi, Hongyan; Dinter, Tilman (2020): Phytoplankton pigment concentration and phytoplankton groups measured on water samples obtained during POLARSTERN cruise PS113 in the Atlantic Ocean [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911061 Clayton, Sophie; Nagai, Takeyoshi; Follows, Michael J (2014): (Supplement 1) Hydrochemistry and phytoplankton pigments in water samples obtained during R/V Natsushima (JAMSTEC) cruise to the Kuroshio Extension Front in October 2009 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.819108 Fragoso, Glaucia M; Poulton, Alex J; Yashayaev, Igor M; Head, Erica J H; Purdie, Duncan A (2017): Spring phytoplankton communities of the Labrador Sea (2005-2014): pigment signatures, photophysiology and elemental ratios [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.871872 Hepach, Helmke; Quack, Birgit; Tegtmeier, Susann; Engel, Anja; Bracher, Astrid; Fuhlbrügge, Steffen; Galgani, Luisa; Atlas, Elliot L; Lampel, Johannes; Frieß, Udo; Krüger, Kirstin (2016): Pigment measured on water bottle samples during METEOR cruise M91 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.864786 Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2018): Phytoplankton pigment concentration measured by HPLC during POLARSTERN cruise PS93.2 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.894872 Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2018): Phytoplankton pigment concentration measured by HPLC during POLARSTERN cruise PS107 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.894860 Liu, Yangyang; Hellmann, Sebastian; Wiegmann, Sonja; Bracher, Astrid (2019): Phytoplankton pigment concentrations measured by HPLC during POLARSTERN cruise PS99.1 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.905502 Alvarado, Leonardo M A; Soppa, Mariana A; Gege, Peter; Losa, Svetlana N; Dröscher, Iris; Xi, Hongyan; Bracher, Astrid (2022): Retrievals of the main phytoplankton groups at Lake Constance using OLCI, DESIS, and evaluated with field observations. 12th EARSeL Workshop on Imaging Spectroscopy in Potsdam, The Photogrammetric Record, 37(177), 145-146, https://doi.org/10.1111/phor.7_12405 Álvarez, Eva; Losa, Svetlana N; Bracher, Astrid; Thoms, Silke; Völker, Christoph (2022): Phytoplankton Light Absorption Impacted by Photoprotective Carotenoids in a Global Ocean Spectrally‐resolved Biogeochemistry Model. Journal of Advances in Modeling Earth Systems, https://doi.org/10.1029/2022MS003126 Brewin, Robert J W; Sathyendranath, Shubha; Jackson, Thomas; Barlow, Raymond G; Brotas, Vanda; Airs, Ruth; Lamont, Tarron (2015): Influence of light in the mixed-layer on the parameters of a three-component model of phytoplankton size class. Remote Sensing of Environment, 168, 437-450, https://doi.org/10.1016/j.rse.2015.07.004 Hirata, Takafumi; Hardman-Mountford, Nicolas J; Brewin, Robert J W; Aiken, James; Barlow, Raymond G; Suzuki, Koji; Isada, Tomonori; Howell, Evan; Hashioka, Taketo; Noguchi-Aita, Maki; Yamanaka, Yasuhiro (2011): Synoptic relationships between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types. Biogeosciences, 8(2), 311-327, https://doi.org/10.5194/bg-8-311-2011 Losa, Svetlana N; Soppa, Mariana A; Dinter, Tilman; Wolanin, Aleksandra; Brewin, Robert J W; Bricaud, Annick; Oelker, Julia; Peeken, Ilka; Gentili, Bernard; Rozanov, Vladimir V; Bracher, Astrid (2017): Synergistic Exploitation of Hyper- and Multi-Spectral Precursor Sentinel Measurements to Determine Phytoplankton Functional Types (SynSenPFT). Frontiers in Marine Science, 4(203), 22 pp, https://doi.org/10.3389/fmars.2017.00203 Soppa, Mariana A; Hirata, Takafumi; Silva, Brenner; Dinter, Tilman; Peeken, Ilka; Wiegmann, Sonja; Bracher, Astrid (2014): Global retrieval of diatom abundance based on phytoplankton pigments and satellite data. Remote Sensing, 6(10), 10089-10106, https://doi.org/10.3390/rs61010089 Uitz, Julia; Claustre, Hervé; Morel, André; Hooker, Stanford B (2006): Vertical distribution of phytoplankton communities in open ocean: An assessment based on surface chlorophyll. Journal of Geophysical Research, 111(C8), https://doi.org/10.1029/2005JC003207 Vidussi, Francesca; Claustre, Hervé; Manca, Benjamino B; Luchetta, Anna; Marty, Jean-Claude (2001): Phytoplankton pigment distribution in relation to upper thermocline circulation in the eastern Mediterranean Sea during winter. Journal of Geophysical Research: Oceans, 106(C9), 19939-19956, https://doi.org/10.1029/1999JC000308 Xi, Hongyan; Losa, Svetlana N; Mangin, Antoine; Garnesson, Philippe; Bretagnon, Marine; Demaria, Julien; Soppa, Mariana A; Hembise Fanton d'Andon, Odile; Bracher, Astrid (2021): Global chlorophyll a concentrations of phytoplankton functional types with detailed uncertainty assessment using multi-sensor ocean color and sea surface temperature satellite products. Journal of Geophysical Research: Oceans, 126(5), https://doi.org/10.1029/2020JC017127 Xi, Hongyan; Losa, Svetlana N; Mangin, Antoine; Soppa, Mariana A; Garnesson, Philippe; Demaria, Julien; Liu, Yangyang; Hembise Fanton d'Andon, Odile; Bracher, Astrid (2020): Global retrieval of phytoplankton functional types based on empirical orthogonal functions using CMEMS GlobColour merged products and further extension to OLCI data. Remote Sensing of Environment, 240, 111704, https://doi.org/10.1016/j.rse.2020.111704 List of sources of the global in situ HPLC pigment data during 1988-2018 (URI: https://download.pangaea.de/reference/117499/attachments/Xi_et_al_2023_supplement_data_sources-1.pdf) https://doi.pangaea.de/10.1594/PANGAEA.954738 https://doi.org/10.1594/PANGAEA.954738 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.95473810.5194/sp-1-osr7-5-202310.1594/PANGAEA.89892010.1594/PANGAEA.89894110.1594/PANGAEA.89892910.1594/PANGAEA.89904310.1594/PANGAEA.91106110.1594/PANGAEA.81910810.1594/PANGAEA.87187210.1594/PANGAEA.86478610.1594/PANGAEA.8 |
_version_ |
1810444450371993600 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.954738 2024-09-15T18:07:04+00:00 Phytoplankton pigment concentrations and phytoplankton groups measured on water samples collected from various expeditions in the Atlantic Ocean from 71°S to 84°N Xi, Hongyan Peeken, Ilka Gomes, Mara Brotas, Vanda Tilstone, Gavin H Brewin, Robert J W Dall'Olmo, Giorgio Tracana, Andreia Alvarado, Leonardo M A Murawski, Sandra Wiegmann, Sonja Bracher, Astrid MEDIAN LATITUDE: 34.627003 * MEDIAN LONGITUDE: -8.107076 * SOUTH-BOUND LATITUDE: -71.364530 * WEST-BOUND LONGITUDE: -60.712180 * NORTH-BOUND LATITUDE: 83.661330 * EAST-BOUND LONGITUDE: 34.040000 * DATE/TIME START: 2009-06-22T18:58:00 * DATE/TIME END: 2019-11-22T08:52:00 * MINIMUM ELEVATION: -5686.0 m * MAXIMUM ELEVATION: -28.8 m 2023 text/tab-separated-values, 37522 data points https://doi.pangaea.de/10.1594/PANGAEA.954738 https://doi.org/10.1594/PANGAEA.954738 en eng PANGAEA Xi, Hongyan; Bretagnon, Marine; Losa, Svetlana N; Brotas, Vanda; Gomes, Mara; Peeken, Ilka; Alvarado, Leonardo M A; Mangin, Antoine; Bracher, Astrid (2023): Satellite monitoring of surface phytoplankton functional types in the Atlantic Ocean over 20 years (2002–2021). in: 7th edition of the Copernicus Ocean State Report (OSR7), edited by: von Schuckmann, K., Moreira, L., Le Traon, P.-Y., Grégoire, M., Marcos, M., Staneva, J., Brasseur, P., Garric, G., Lionello, P., Karstensen, J., and Neukermans, G., State of the Planet, 1-osr7(5), https://doi.org/10.5194/sp-1-osr7-5-2023 Bracher, Astrid (2019): Phytoplankton pigment concentrations during RV Sonne cruise SO243 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898920 Bracher, Astrid (2019): Phytoplankton pigment concentrations in the Southern Ocean during RV POLARSTERN cruise PS103 in Dec 2016 to Jan 2017 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898941 Bracher, Astrid; Cheah, Wee; Wiegmann, Sonja (2019): Phytoplankton pigment concentrations in the tropical Indian Ocean in July and August 2014 during RV Sonne cruises SO234 and SO235 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.898929 Bracher, Astrid; Wiegmann, Sonja (2019): Phytoplankton pigment concentrations in the North Sea and Sogne Fjord from 29 April to 7 May 2016 during RV HEINCKE cruise HE462 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.899043 Bracher, Astrid; Wiegmann, Sonja; Xi, Hongyan; Dinter, Tilman (2020): Phytoplankton pigment concentration and phytoplankton groups measured on water samples obtained during POLARSTERN cruise PS113 in the Atlantic Ocean [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911061 Clayton, Sophie; Nagai, Takeyoshi; Follows, Michael J (2014): (Supplement 1) Hydrochemistry and phytoplankton pigments in water samples obtained during R/V Natsushima (JAMSTEC) cruise to the Kuroshio Extension Front in October 2009 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.819108 Fragoso, Glaucia M; Poulton, Alex J; Yashayaev, Igor M; Head, Erica J H; Purdie, Duncan A (2017): Spring phytoplankton communities of the Labrador Sea (2005-2014): pigment signatures, photophysiology and elemental ratios [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.871872 Hepach, Helmke; Quack, Birgit; Tegtmeier, Susann; Engel, Anja; Bracher, Astrid; Fuhlbrügge, Steffen; Galgani, Luisa; Atlas, Elliot L; Lampel, Johannes; Frieß, Udo; Krüger, Kirstin (2016): Pigment measured on water bottle samples during METEOR cruise M91 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.864786 Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2018): Phytoplankton pigment concentration measured by HPLC during POLARSTERN cruise PS93.2 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.894872 Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2018): Phytoplankton pigment concentration measured by HPLC during POLARSTERN cruise PS107 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.894860 Liu, Yangyang; Hellmann, Sebastian; Wiegmann, Sonja; Bracher, Astrid (2019): Phytoplankton pigment concentrations measured by HPLC during POLARSTERN cruise PS99.1 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.905502 Alvarado, Leonardo M A; Soppa, Mariana A; Gege, Peter; Losa, Svetlana N; Dröscher, Iris; Xi, Hongyan; Bracher, Astrid (2022): Retrievals of the main phytoplankton groups at Lake Constance using OLCI, DESIS, and evaluated with field observations. 12th EARSeL Workshop on Imaging Spectroscopy in Potsdam, The Photogrammetric Record, 37(177), 145-146, https://doi.org/10.1111/phor.7_12405 Álvarez, Eva; Losa, Svetlana N; Bracher, Astrid; Thoms, Silke; Völker, Christoph (2022): Phytoplankton Light Absorption Impacted by Photoprotective Carotenoids in a Global Ocean Spectrally‐resolved Biogeochemistry Model. Journal of Advances in Modeling Earth Systems, https://doi.org/10.1029/2022MS003126 Brewin, Robert J W; Sathyendranath, Shubha; Jackson, Thomas; Barlow, Raymond G; Brotas, Vanda; Airs, Ruth; Lamont, Tarron (2015): Influence of light in the mixed-layer on the parameters of a three-component model of phytoplankton size class. Remote Sensing of Environment, 168, 437-450, https://doi.org/10.1016/j.rse.2015.07.004 Hirata, Takafumi; Hardman-Mountford, Nicolas J; Brewin, Robert J W; Aiken, James; Barlow, Raymond G; Suzuki, Koji; Isada, Tomonori; Howell, Evan; Hashioka, Taketo; Noguchi-Aita, Maki; Yamanaka, Yasuhiro (2011): Synoptic relationships between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types. Biogeosciences, 8(2), 311-327, https://doi.org/10.5194/bg-8-311-2011 Losa, Svetlana N; Soppa, Mariana A; Dinter, Tilman; Wolanin, Aleksandra; Brewin, Robert J W; Bricaud, Annick; Oelker, Julia; Peeken, Ilka; Gentili, Bernard; Rozanov, Vladimir V; Bracher, Astrid (2017): Synergistic Exploitation of Hyper- and Multi-Spectral Precursor Sentinel Measurements to Determine Phytoplankton Functional Types (SynSenPFT). Frontiers in Marine Science, 4(203), 22 pp, https://doi.org/10.3389/fmars.2017.00203 Soppa, Mariana A; Hirata, Takafumi; Silva, Brenner; Dinter, Tilman; Peeken, Ilka; Wiegmann, Sonja; Bracher, Astrid (2014): Global retrieval of diatom abundance based on phytoplankton pigments and satellite data. Remote Sensing, 6(10), 10089-10106, https://doi.org/10.3390/rs61010089 Uitz, Julia; Claustre, Hervé; Morel, André; Hooker, Stanford B (2006): Vertical distribution of phytoplankton communities in open ocean: An assessment based on surface chlorophyll. Journal of Geophysical Research, 111(C8), https://doi.org/10.1029/2005JC003207 Vidussi, Francesca; Claustre, Hervé; Manca, Benjamino B; Luchetta, Anna; Marty, Jean-Claude (2001): Phytoplankton pigment distribution in relation to upper thermocline circulation in the eastern Mediterranean Sea during winter. Journal of Geophysical Research: Oceans, 106(C9), 19939-19956, https://doi.org/10.1029/1999JC000308 Xi, Hongyan; Losa, Svetlana N; Mangin, Antoine; Garnesson, Philippe; Bretagnon, Marine; Demaria, Julien; Soppa, Mariana A; Hembise Fanton d'Andon, Odile; Bracher, Astrid (2021): Global chlorophyll a concentrations of phytoplankton functional types with detailed uncertainty assessment using multi-sensor ocean color and sea surface temperature satellite products. Journal of Geophysical Research: Oceans, 126(5), https://doi.org/10.1029/2020JC017127 Xi, Hongyan; Losa, Svetlana N; Mangin, Antoine; Soppa, Mariana A; Garnesson, Philippe; Demaria, Julien; Liu, Yangyang; Hembise Fanton d'Andon, Odile; Bracher, Astrid (2020): Global retrieval of phytoplankton functional types based on empirical orthogonal functions using CMEMS GlobColour merged products and further extension to OLCI data. Remote Sensing of Environment, 240, 111704, https://doi.org/10.1016/j.rse.2020.111704 List of sources of the global in situ HPLC pigment data during 1988-2018 (URI: https://download.pangaea.de/reference/117499/attachments/Xi_et_al_2023_supplement_data_sources-1.pdf) https://doi.pangaea.de/10.1594/PANGAEA.954738 https://doi.org/10.1594/PANGAEA.954738 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess 19-Butanoyloxyfucoxanthin 19-Hexanoyloxyfucoxanthin AC3 Alloxanthin AMT28 AMT28_10-33 AMT28_1-1 AMT28_11-36 AMT28_12-41 AMT28_13-44 AMT28_14-48 AMT28_15-50 AMT28_16-57 AMT28_17-58 AMT28_18-64 AMT28_19-66 AMT28_20-71 AMT28_21-73 AMT28_22-78 AMT28_23-80 AMT28_2-4 AMT28_24-85 AMT28_25-87 AMT28_27-93 AMT28_28-95 AMT28_29-100 AMT28_30-101 AMT28_31-105 AMT28_32-111 AMT28_33-112 AMT28_34-117 AMT28_35-120 AMT28_36-124 AMT28_37-126 AMT28_3-8 AMT28_38-133 AMT28_40-137 AMT28_4-11 AMT28_41-142 AMT28_43-147 AMT28_44-150 AMT28_45-155 AMT28_46-158 AMT28_47-164 AMT28_48-166 AMT28_49-174 AMT28_50-176 AMT28_51-181 AMT28_5-13 AMT28_52-183 dataset 2023 ftpangaea https://doi.org/10.1594/PANGAEA.95473810.5194/sp-1-osr7-5-202310.1594/PANGAEA.89892010.1594/PANGAEA.89894110.1594/PANGAEA.89892910.1594/PANGAEA.89904310.1594/PANGAEA.91106110.1594/PANGAEA.81910810.1594/PANGAEA.87187210.1594/PANGAEA.86478610.1594/PANGAEA.8 2024-08-21T00:02:27Z This data set composes a large amount of quality controlled in situ measurements of major pigments based on HPLC collected from various expeditions across the Atlantic Ocean spanning from 71°S to 84°N, including 11 expeditions with RV Polarstern from the North Atlantic to the Arctic Fram Strait: PS74, PSS76, PS78, PS80, PS85, PS93.2 (https://doi.org/10.1594/PANGAEA.894872), PS99.1 (https://doi.org/10.1594/PANGAEA.905502), PS99.2 ( https://doi.org/10.1594/PANGAEA.894874), PS106 (https://doi.org/10.1594/PANGAEA.899284), PS107 (https://doi.org/10.1594/PANGAEA.894860), PS121 (https://doi.org/10.1594/PANGAEA.941011), four expeditions (two with RV Polarstern and two Atlantic Meridional Transect expeditions with RRS James Clark Ross and RRS Discovery) in the trans-Atlantic Ocean: PS113 ( https://doi.org/10.1594/PANGAEA.911061), PS120, AMT28 and AMT29, and one expedition with RV Polarstern in the Southern Ocean: PS103 (https://doi.org/10.1594/PANGAEA.898941). Chlorophyll a concentration (Chl-a) of six phytoplankton functions groups (PFTs) derived from these pigments have been also included. This published data set has contributed to validate satellite PFT products available on the EU funded Copernicus Marine Service (CMEMS, https://marine.copernicus.eu/), which are derived from multi-sensor ocean colour reflectance data and sea surface temperature using an empirical orthogonal function based approach (Xi et al. 2020; 2021). Description on in situ PFT Chl-a determination from pigment data: PFT Chl-a in this data set were derived using an updated diagnostic pigment analysis (DPA) method (Soppa et al., 2014; Losa et al., 2017) with retuned coefficients by Alvarado et al (2021), that was originally developed by Vidussi et al. (2001), adapted in Uitz et al. (2006) and further refined by Hirata et al. (2011) and Brewin et al. (2015). The values of retuned DPA weighting coefficients for PFT Chl-a determination are: 1.56 for fucoxanthin, 1.53 for peridinin, 0.89 for 19'-hexanoyloxyfucoxanthin, 0.44 for ... Dataset Fram Strait North Atlantic Phytoplankton Southern Ocean PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-60.712180,34.040000,83.661330,-71.364530) |