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record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.953109 2023-05-15T17:50:14+02:00 Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer Venn, Alexander A Tambutté, Eric Comeau, Steeve Tambutté, Sylvie 2022-12-23 text/tab-separated-values, 350 data points https://doi.pangaea.de/10.1594/PANGAEA.953109 en eng PANGAEA Venn, Alexander A; Tambutté, Eric; Comeau, Steeve; Tambutté, Sylvie (2022): Proton gradients across the coral calcifying cell layer: Effects of light, ocean acidification and carbonate chemistry. Frontiers in Marine Science, 9, 973908, https://doi.org/10.3389/fmars.2022.973908 Venn, Alexander A; Tambutté, Eric; Steeve, Comeau; Tambutté, Sylvie (2022): Proton gradients across the coral calcifying cell layer: effects of light, ocean acidification and carbonate chemistry. PANGAEA, https://doi.org/10.1594/PANGAEA.949400 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.953109 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess CC-BY Acid-base regulation Alkalinity total Animalia Aragonite saturation state Benthic animals Benthos Bicarbonate ion Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Cnidaria Comment Confocal Microscope (Leica SP5) Containers and aquaria (20-1000 L or < 1 m**2) Experiment Experiment/study setup Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Laboratory experiment Laboratory strains Not applicable OA-ICC Ocean Acidification International Coordination Centre Other Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) pH extracellular standard deviation intracellular mesoglea seawater Dataset 2022 ftpangaea https://doi.org/10.3389/fmars.2022.973908 https://doi.org/10.1594/PANGAEA.949400 2023-01-20T09:16:39Z In corals, pH regulation of the extracellular calcifying medium (ECM) by the calcifying cell layer is a crucial step in the calcification process and is potentially important to influencing how corals respond to ocean acidification. Here, we analyzed the growing edge of the reef coral Stylophora pistillata to make the first characterization of the proton gradient across the coral calcifying epithelium. At seawater pH 8 we found that while the calcifying epithelium elevates pH in the ECM on its apical side above that of seawater, pH on its basal side in the mesoglea is markedly lower, highlighting that the calcifying cells are exposed to a microenvironment distinct from the external environment. Coral symbiont photosynthesis elevates pH in the mesoglea, but experimental ocean acidification and decreased seawater inorganic carbon concentration lead to large declines in mesoglea pH relative to the ECM, which is maintained relatively stable. Together, our results indicate that the coral calcifying epithelium is functionally polarized and that environmental variation impacts pHECM regulation through its effects on the basal side of the calcifying cells. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Acid-base regulation
Alkalinity
total
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Comment
Confocal Microscope (Leica SP5)
Containers and aquaria (20-1000 L or < 1 m**2)
Experiment
Experiment/study setup
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Laboratory experiment
Laboratory strains
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Other
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
extracellular
standard deviation
intracellular
mesoglea
seawater
spellingShingle Acid-base regulation
Alkalinity
total
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Comment
Confocal Microscope (Leica SP5)
Containers and aquaria (20-1000 L or < 1 m**2)
Experiment
Experiment/study setup
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Laboratory experiment
Laboratory strains
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Other
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
extracellular
standard deviation
intracellular
mesoglea
seawater
Venn, Alexander A
Tambutté, Eric
Comeau, Steeve
Tambutté, Sylvie
Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
topic_facet Acid-base regulation
Alkalinity
total
Animalia
Aragonite saturation state
Benthic animals
Benthos
Bicarbonate ion
Calcite saturation state
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Cnidaria
Comment
Confocal Microscope (Leica SP5)
Containers and aquaria (20-1000 L or < 1 m**2)
Experiment
Experiment/study setup
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Laboratory experiment
Laboratory strains
Not applicable
OA-ICC
Ocean Acidification International Coordination Centre
Other
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
pH
extracellular
standard deviation
intracellular
mesoglea
seawater
description In corals, pH regulation of the extracellular calcifying medium (ECM) by the calcifying cell layer is a crucial step in the calcification process and is potentially important to influencing how corals respond to ocean acidification. Here, we analyzed the growing edge of the reef coral Stylophora pistillata to make the first characterization of the proton gradient across the coral calcifying epithelium. At seawater pH 8 we found that while the calcifying epithelium elevates pH in the ECM on its apical side above that of seawater, pH on its basal side in the mesoglea is markedly lower, highlighting that the calcifying cells are exposed to a microenvironment distinct from the external environment. Coral symbiont photosynthesis elevates pH in the mesoglea, but experimental ocean acidification and decreased seawater inorganic carbon concentration lead to large declines in mesoglea pH relative to the ECM, which is maintained relatively stable. Together, our results indicate that the coral calcifying epithelium is functionally polarized and that environmental variation impacts pHECM regulation through its effects on the basal side of the calcifying cells.
format Dataset
author Venn, Alexander A
Tambutté, Eric
Comeau, Steeve
Tambutté, Sylvie
author_facet Venn, Alexander A
Tambutté, Eric
Comeau, Steeve
Tambutté, Sylvie
author_sort Venn, Alexander A
title Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
title_short Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
title_full Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
title_fullStr Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
title_full_unstemmed Seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
title_sort seawater carbonate chemistry and proton gradients across the coral calcifying cell layer
publisher PANGAEA
publishDate 2022
url https://doi.pangaea.de/10.1594/PANGAEA.953109
genre Ocean acidification
genre_facet Ocean acidification
op_relation Venn, Alexander A; Tambutté, Eric; Comeau, Steeve; Tambutté, Sylvie (2022): Proton gradients across the coral calcifying cell layer: Effects of light, ocean acidification and carbonate chemistry. Frontiers in Marine Science, 9, 973908, https://doi.org/10.3389/fmars.2022.973908
Venn, Alexander A; Tambutté, Eric; Steeve, Comeau; Tambutté, Sylvie (2022): Proton gradients across the coral calcifying cell layer: effects of light, ocean acidification and carbonate chemistry. PANGAEA, https://doi.org/10.1594/PANGAEA.949400
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.953109
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2022.973908
https://doi.org/10.1594/PANGAEA.949400
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