Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod
Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evol...
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.946063 2024-09-15T18:24:23+00:00 Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod Brennan, Reid S deMayo, James A Dam, Hans G Finiguerra, Michael B Baumann, Hannes Pespeni, Melissa H LATITUDE: 41.320725 * LONGITUDE: -72.001643 * DATE/TIME START: 2016-06-01T00:00:00 * DATE/TIME END: 2016-06-30T00:00:00 2022 text/tab-separated-values, 30685 data points https://doi.pangaea.de/10.1594/PANGAEA.946063 https://doi.org/10.1594/PANGAEA.946063 en eng PANGAEA Brennan, Reid S; deMayo, James A; Dam, Hans G; Finiguerra, Michael B; Baumann, Hannes; Pespeni, Melissa H (2022): Loss of transcriptional plasticity but sustained adaptive capacity after adaptation to global change conditions in a marine copepod. Nature Communications, 13(1), https://doi.org/10.1038/s41467-022-28742-6 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.946063 https://doi.org/10.1594/PANGAEA.946063 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Acartia tonsa Alkalinity total Animalia Aragonite saturation state Arthropoda Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Counts Development Egg production rate per female Eggs hatched unhatched Esker_Point_Beach Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Generation Group Hatching frequency Identification Laboratory experiment Mortality/Survival North Atlantic Nucleotide diversity OA-ICC Ocean Acidification International Coordination Centre Other Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phytoplankton biomass as carbon Principal component 1 Principal component 2 Proportion of survival Replicate Reproduction Reproductive rate dataset 2022 ftpangaea https://doi.org/10.1594/PANGAEA.94606310.1038/s41467-022-28742-6 2024-07-24T02:31:34Z Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evolution followed by three generations of reciprocal transplants, we investigated the relationship between adaptation and plasticity in the marine copepod, Acartia tonsa, in future global change conditions (high temperature and high CO2). We found parallel adaptation to global change conditions in genes related to stress response, gene expression regulation, actin regulation, developmental processes, and energy production. However, reciprocal transplantation showed that adaptation resulted in a loss of transcriptional plasticity, reduced fecundity, and reduced population growth when global change-adapted animals were returned to ambient conditions or reared in low food conditions. However, after three successive transplant generations, global change-adapted animals were able to match the ambient-adaptive transcriptional profile. Concurrent changes in allele frequencies and erosion of nucleotide diversity suggest that this recovery occurred via adaptation back to ancestral conditions. These results demonstrate that while plasticity facilitated initial survival in global change conditions, it eroded after 20 generations as populations adapted, limiting resilience to new stressors and previously benign environments. Dataset North Atlantic Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(-72.001643,-72.001643,41.320725,41.320725) |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Acartia tonsa Alkalinity total Animalia Aragonite saturation state Arthropoda Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Counts Development Egg production rate per female Eggs hatched unhatched Esker_Point_Beach Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Generation Group Hatching frequency Identification Laboratory experiment Mortality/Survival North Atlantic Nucleotide diversity OA-ICC Ocean Acidification International Coordination Centre Other Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phytoplankton biomass as carbon Principal component 1 Principal component 2 Proportion of survival Replicate Reproduction Reproductive rate |
spellingShingle |
Acartia tonsa Alkalinity total Animalia Aragonite saturation state Arthropoda Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Counts Development Egg production rate per female Eggs hatched unhatched Esker_Point_Beach Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Generation Group Hatching frequency Identification Laboratory experiment Mortality/Survival North Atlantic Nucleotide diversity OA-ICC Ocean Acidification International Coordination Centre Other Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phytoplankton biomass as carbon Principal component 1 Principal component 2 Proportion of survival Replicate Reproduction Reproductive rate Brennan, Reid S deMayo, James A Dam, Hans G Finiguerra, Michael B Baumann, Hannes Pespeni, Melissa H Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
topic_facet |
Acartia tonsa Alkalinity total Animalia Aragonite saturation state Arthropoda Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved Carbonate ion Carbonate system computation flag Carbon dioxide Coast and continental shelf Counts Development Egg production rate per female Eggs hatched unhatched Esker_Point_Beach Figure Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Gene expression (incl. proteomics) Generation Group Hatching frequency Identification Laboratory experiment Mortality/Survival North Atlantic Nucleotide diversity OA-ICC Ocean Acidification International Coordination Centre Other Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Pelagos pH Phytoplankton biomass as carbon Principal component 1 Principal component 2 Proportion of survival Replicate Reproduction Reproductive rate |
description |
Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evolution followed by three generations of reciprocal transplants, we investigated the relationship between adaptation and plasticity in the marine copepod, Acartia tonsa, in future global change conditions (high temperature and high CO2). We found parallel adaptation to global change conditions in genes related to stress response, gene expression regulation, actin regulation, developmental processes, and energy production. However, reciprocal transplantation showed that adaptation resulted in a loss of transcriptional plasticity, reduced fecundity, and reduced population growth when global change-adapted animals were returned to ambient conditions or reared in low food conditions. However, after three successive transplant generations, global change-adapted animals were able to match the ambient-adaptive transcriptional profile. Concurrent changes in allele frequencies and erosion of nucleotide diversity suggest that this recovery occurred via adaptation back to ancestral conditions. These results demonstrate that while plasticity facilitated initial survival in global change conditions, it eroded after 20 generations as populations adapted, limiting resilience to new stressors and previously benign environments. |
format |
Dataset |
author |
Brennan, Reid S deMayo, James A Dam, Hans G Finiguerra, Michael B Baumann, Hannes Pespeni, Melissa H |
author_facet |
Brennan, Reid S deMayo, James A Dam, Hans G Finiguerra, Michael B Baumann, Hannes Pespeni, Melissa H |
author_sort |
Brennan, Reid S |
title |
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
title_short |
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
title_full |
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
title_fullStr |
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
title_full_unstemmed |
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
title_sort |
seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod |
publisher |
PANGAEA |
publishDate |
2022 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.946063 https://doi.org/10.1594/PANGAEA.946063 |
op_coverage |
LATITUDE: 41.320725 * LONGITUDE: -72.001643 * DATE/TIME START: 2016-06-01T00:00:00 * DATE/TIME END: 2016-06-30T00:00:00 |
long_lat |
ENVELOPE(-72.001643,-72.001643,41.320725,41.320725) |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
Brennan, Reid S; deMayo, James A; Dam, Hans G; Finiguerra, Michael B; Baumann, Hannes; Pespeni, Melissa H (2022): Loss of transcriptional plasticity but sustained adaptive capacity after adaptation to global change conditions in a marine copepod. Nature Communications, 13(1), https://doi.org/10.1038/s41467-022-28742-6 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.946063 https://doi.org/10.1594/PANGAEA.946063 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.94606310.1038/s41467-022-28742-6 |
_version_ |
1810464720520478720 |