Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012
In this study, we measured a range of biogeochemical parameters down the Laptev Sea continental slope, from around 50 to 3400 m water depth. These included chlorophyll pigments, extracellular enzymatic activity, diffusive oxygen uptake and prokaryotic cell abundance. Our aim was to compare the measu...
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Language: | English |
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PANGAEA
2022
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Online Access: | https://doi.pangaea.de/10.1594/PANGAEA.945454 https://doi.org/10.1594/PANGAEA.945454 |
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.945454 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
ABYSS Arctic Ocean ARK-XXVII/3 Assessment of bacterial life and matter cycling in deep-sea surface sediments Calculated from oxygen uptake (Boetius & Damm 1998) Carbon total flux Event label Laptev Sea Multicorer with television Oxygen microsensor Clark type (Revsbech 1989) Oxygen uptake diffusive Polarstern PS80/292-1 PS80/299-1 PS80/309-1 PS80/310-1 PS80/312-1 PS80/313-1 PS80/318-1 PS80/320-1 PS80 IceArc Sample comment Standard deviation TVMUC |
spellingShingle |
ABYSS Arctic Ocean ARK-XXVII/3 Assessment of bacterial life and matter cycling in deep-sea surface sediments Calculated from oxygen uptake (Boetius & Damm 1998) Carbon total flux Event label Laptev Sea Multicorer with television Oxygen microsensor Clark type (Revsbech 1989) Oxygen uptake diffusive Polarstern PS80/292-1 PS80/299-1 PS80/309-1 PS80/310-1 PS80/312-1 PS80/313-1 PS80/318-1 PS80/320-1 PS80 IceArc Sample comment Standard deviation TVMUC Wenzhöfer, Frank Bienhold, Christina Boetius, Antje Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
topic_facet |
ABYSS Arctic Ocean ARK-XXVII/3 Assessment of bacterial life and matter cycling in deep-sea surface sediments Calculated from oxygen uptake (Boetius & Damm 1998) Carbon total flux Event label Laptev Sea Multicorer with television Oxygen microsensor Clark type (Revsbech 1989) Oxygen uptake diffusive Polarstern PS80/292-1 PS80/299-1 PS80/309-1 PS80/310-1 PS80/312-1 PS80/313-1 PS80/318-1 PS80/320-1 PS80 IceArc Sample comment Standard deviation TVMUC |
description |
In this study, we measured a range of biogeochemical parameters down the Laptev Sea continental slope, from around 50 to 3400 m water depth. These included chlorophyll pigments, extracellular enzymatic activity, diffusive oxygen uptake and prokaryotic cell abundance. Our aim was to compare the measurements between two years about two decades apart (1993 and 2012). Benthic oxygen consumption rates were determined from ex situ microsensor measurements of diffusive oxygen uptake in retrieved sediment cores, consistent with Boetius & Damm 1998 (doi:10.1016/S0967-0637(97)00052-6). Directly after recovery, cores were stored at in situ temperature and the overlying water gently stirred by rotating small magnets to avoid the development of a stagnate water body above the sediment. High-resolution microprofiles across the sediment water interface were measured using Clark-type O2 microelectrodes equipped with a guard cathode (Revsbach 1989 doi:10.4319/lo.1989.34.2.0474) mounted to motorized micromanipulator (Glud et al. 2009 doi:10.4319/lo.2009.54.1.0001). Sensors were calibrated at in situ temperature against (1) air-saturated bottom water taken from the overlying water from the MUC cores (100% saturation), and (2) dithionate-spiked bottom water (anoxic). Microprofiles across the sediment-water interface were measured with a vertical resolution of 100 μm on a total length of max. 5 cm. The diffusive oxygen uptake (DOU, mmol/m²/d¹) was calculated from the O2 gradient just below the sediment surface and Fick's first law of diffusion (Rasmussen and Jorgensen 1992 doi:10.3354/MEPS081289). DOU = por * Ds * δC/δz where Ds (cm⁻² s⁻¹) = molecular diffusion coefficient in sediment, calculated as Ds = D0 * por/m , where por is the porosity, D0 = diffusion coefficient in water and m = 3, C (μM) = solute concentration, z (cm) = depth in the sediment. Carbon flux (remineralization rates, mg C/m²/d) were calculated from oxygen uptake at the seafloor assuming a molar ratio of C = 0.77 O2 as in Boetius & Damm 1998 ... |
format |
Dataset |
author |
Wenzhöfer, Frank Bienhold, Christina Boetius, Antje |
author_facet |
Wenzhöfer, Frank Bienhold, Christina Boetius, Antje |
author_sort |
Wenzhöfer, Frank |
title |
Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
title_short |
Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
title_full |
Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
title_fullStr |
Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
title_full_unstemmed |
Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 |
title_sort |
diffusive oxygen uptake from the laptev sea (arctic ocean) during polarstern cruise ark-xxvii/3 (icearc) from august-september 2012 |
publisher |
PANGAEA |
publishDate |
2022 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.945454 https://doi.org/10.1594/PANGAEA.945454 |
op_coverage |
MEDIAN LATITUDE: 78.139077 * MEDIAN LONGITUDE: 121.491029 * SOUTH-BOUND LATITUDE: 77.169170 * WEST-BOUND LONGITUDE: 114.916000 * NORTH-BOUND LATITUDE: 79.649820 * EAST-BOUND LONGITUDE: 133.332780 * DATE/TIME START: 2012-08-28T21:22:00 * DATE/TIME END: 2012-09-02T20:39:00 * MINIMUM ELEVATION: -3387.4 m * MAXIMUM ELEVATION: -70.1 m |
long_lat |
ENVELOPE(114.916000,133.332780,79.649820,77.169170) |
genre |
Arctic Arctic Ocean laptev Laptev Sea |
genre_facet |
Arctic Arctic Ocean laptev Laptev Sea |
op_source |
Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven |
op_relation |
Bienhold, Christina (2021): Benthic bacterial diversity along the Laptev Sea continental slope in the Arctic Ocean between two contrasting years (1993 and 2012) [dataset]. insdc:PRJEB43433 Bienhold, Christina; Schourup-Kristensen, Vibe; Krumpen, Thomas; Nöthig, Eva-Maria; Wenzhöfer, Frank; Korhonen, Meri; Vredenborg, Myriel; Hehemann, Laura; Boetius, Antje (2022): Effects of sea ice retreat and ocean warming on the Laptev Sea continental slope ecosystem (1993 vs 2012). Frontiers in Marine Science, 9, 1004959, https://doi.org/10.3389/fmars.2022.1004959 Wenzhöfer, Frank; Bienhold, Christina; Boetius, Antje (2018): Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.892286 https://doi.pangaea.de/10.1594/PANGAEA.945454 https://doi.org/10.1594/PANGAEA.945454 |
op_rights |
CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.94545410.3389/fmars.2022.100495910.1594/PANGAEA.892286 |
_version_ |
1810293055721308160 |
spelling |
ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.945454 2024-09-15T17:51:13+00:00 Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 Wenzhöfer, Frank Bienhold, Christina Boetius, Antje MEDIAN LATITUDE: 78.139077 * MEDIAN LONGITUDE: 121.491029 * SOUTH-BOUND LATITUDE: 77.169170 * WEST-BOUND LONGITUDE: 114.916000 * NORTH-BOUND LATITUDE: 79.649820 * EAST-BOUND LONGITUDE: 133.332780 * DATE/TIME START: 2012-08-28T21:22:00 * DATE/TIME END: 2012-09-02T20:39:00 * MINIMUM ELEVATION: -3387.4 m * MAXIMUM ELEVATION: -70.1 m 2022 text/tab-separated-values, 31 data points https://doi.pangaea.de/10.1594/PANGAEA.945454 https://doi.org/10.1594/PANGAEA.945454 en eng PANGAEA Bienhold, Christina (2021): Benthic bacterial diversity along the Laptev Sea continental slope in the Arctic Ocean between two contrasting years (1993 and 2012) [dataset]. insdc:PRJEB43433 Bienhold, Christina; Schourup-Kristensen, Vibe; Krumpen, Thomas; Nöthig, Eva-Maria; Wenzhöfer, Frank; Korhonen, Meri; Vredenborg, Myriel; Hehemann, Laura; Boetius, Antje (2022): Effects of sea ice retreat and ocean warming on the Laptev Sea continental slope ecosystem (1993 vs 2012). Frontiers in Marine Science, 9, 1004959, https://doi.org/10.3389/fmars.2022.1004959 Wenzhöfer, Frank; Bienhold, Christina; Boetius, Antje (2018): Diffusive oxygen uptake from the Laptev Sea (Arctic Ocean) during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012 [dataset]. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, https://doi.org/10.1594/PANGAEA.892286 https://doi.pangaea.de/10.1594/PANGAEA.945454 https://doi.org/10.1594/PANGAEA.945454 CC-BY-3.0: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted info:eu-repo/semantics/openAccess Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven ABYSS Arctic Ocean ARK-XXVII/3 Assessment of bacterial life and matter cycling in deep-sea surface sediments Calculated from oxygen uptake (Boetius & Damm 1998) Carbon total flux Event label Laptev Sea Multicorer with television Oxygen microsensor Clark type (Revsbech 1989) Oxygen uptake diffusive Polarstern PS80/292-1 PS80/299-1 PS80/309-1 PS80/310-1 PS80/312-1 PS80/313-1 PS80/318-1 PS80/320-1 PS80 IceArc Sample comment Standard deviation TVMUC dataset 2022 ftpangaea https://doi.org/10.1594/PANGAEA.94545410.3389/fmars.2022.100495910.1594/PANGAEA.892286 2024-07-24T02:31:34Z In this study, we measured a range of biogeochemical parameters down the Laptev Sea continental slope, from around 50 to 3400 m water depth. These included chlorophyll pigments, extracellular enzymatic activity, diffusive oxygen uptake and prokaryotic cell abundance. Our aim was to compare the measurements between two years about two decades apart (1993 and 2012). Benthic oxygen consumption rates were determined from ex situ microsensor measurements of diffusive oxygen uptake in retrieved sediment cores, consistent with Boetius & Damm 1998 (doi:10.1016/S0967-0637(97)00052-6). Directly after recovery, cores were stored at in situ temperature and the overlying water gently stirred by rotating small magnets to avoid the development of a stagnate water body above the sediment. High-resolution microprofiles across the sediment water interface were measured using Clark-type O2 microelectrodes equipped with a guard cathode (Revsbach 1989 doi:10.4319/lo.1989.34.2.0474) mounted to motorized micromanipulator (Glud et al. 2009 doi:10.4319/lo.2009.54.1.0001). Sensors were calibrated at in situ temperature against (1) air-saturated bottom water taken from the overlying water from the MUC cores (100% saturation), and (2) dithionate-spiked bottom water (anoxic). Microprofiles across the sediment-water interface were measured with a vertical resolution of 100 μm on a total length of max. 5 cm. The diffusive oxygen uptake (DOU, mmol/m²/d¹) was calculated from the O2 gradient just below the sediment surface and Fick's first law of diffusion (Rasmussen and Jorgensen 1992 doi:10.3354/MEPS081289). DOU = por * Ds * δC/δz where Ds (cm⁻² s⁻¹) = molecular diffusion coefficient in sediment, calculated as Ds = D0 * por/m , where por is the porosity, D0 = diffusion coefficient in water and m = 3, C (μM) = solute concentration, z (cm) = depth in the sediment. Carbon flux (remineralization rates, mg C/m²/d) were calculated from oxygen uptake at the seafloor assuming a molar ratio of C = 0.77 O2 as in Boetius & Damm 1998 ... Dataset Arctic Arctic Ocean laptev Laptev Sea PANGAEA - Data Publisher for Earth & Environmental Science ENVELOPE(114.916000,133.332780,79.649820,77.169170) |